Basic Information

Insect: Rhingia campestris
Gene Symbol: RREB1
Assembly: GCA_932526435.1
Location: CAKOBE010000093.1:546462-552221[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 4.4 8.8 0.8 1 21 236 256 236 258 0.93

2 14 0.00029 0.041 15.2 0.2 1 23 268 290 268 290 0.98

3 14 8.4e-06 0.0012 20.1 5.2 1 23 296 318 296 318 0.98

4 14 0.028 3.9 9.0 2.8 2 19 518 535 518 535 0.97

5 14 8.8 1.2e+03 1.1 0.3 1 19 578 596 578 599 0.79

6 14 0.0078 1.1 10.7 0.1 1 23 747 769 747 769 0.97

7 14 0.00016 0.022 16.0 1.7 1 23 778 800 778 800 0.99

8 14 0.00041 0.057 14.7 2.0 1 23 806 829 806 829 0.97

9 14 0.00083 0.12 13.8 2.1 1 23 1171 1194 1171 1194 0.95

10 14 7.5e-05 0.011 17.1 0.3 2 23 1499 1520 1498 1520 0.97

11 14 0.13 18 6.9 6.3 1 23 1526 1549 1526 1549 0.97

12 14 4.8 6.7e+02 1.9 5.3 1 23 1643 1665 1643 1666 0.93

13 14 0.0074 1 10.8 0.5 3 23 1715 1735 1713 1735 0.96

14 14 0.0012 0.17 13.2 4.8 1 23 1741 1763 1741 1763 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	4.4	8.8	0.8	1	21	236	256	236	258	0.93
2	14	0.00029	0.041	15.2	0.2	1	23	268	290	268	290	0.98
3	14	8.4e-06	0.0012	20.1	5.2	1	23	296	318	296	318	0.98
4	14	0.028	3.9	9.0	2.8	2	19	518	535	518	535	0.97
5	14	8.8	1.2e+03	1.1	0.3	1	19	578	596	578	599	0.79
6	14	0.0078	1.1	10.7	0.1	1	23	747	769	747	769	0.97
7	14	0.00016	0.022	16.0	1.7	1	23	778	800	778	800	0.99
8	14	0.00041	0.057	14.7	2.0	1	23	806	829	806	829	0.97
9	14	0.00083	0.12	13.8	2.1	1	23	1171	1194	1171	1194	0.95
10	14	7.5e-05	0.011	17.1	0.3	2	23	1499	1520	1498	1520	0.97
11	14	0.13	18	6.9	6.3	1	23	1526	1549	1526	1549	0.97
12	14	4.8	6.7e+02	1.9	5.3	1	23	1643	1665	1643	1666	0.93
13	14	0.0074	1	10.8	0.5	3	23	1715	1735	1713	1735	0.96
14	14	0.0012	0.17	13.2	4.8	1	23	1741	1763	1741	1763	0.99

Sequence Information

Coding Sequence: ATGTTAAAGACATCAATTAAAAAGCAATTACCCGACATTCCAATGCGCAAAATGGATCGACGCGACTCAACCACATCCGACTCATCAGTCGAACCCATGGATTTGGGTCGTACACCAGAAATCAAAAAAGAAATTACGCCAGCATTACAGATGCCAACAGCAGCAACACTTAAAGATGCCATTTTATCAGATGCCAATACAAAATATACCACACGTCACGAATCGGATGCCGACGAATCAGACGACAACAACAAAGATCACGATCACCATCATCAGCGACGATCACACAGTCAACATCACTACCATCATCGTCGTCGTGCTGGCAACAGTGGCCGTGACAAACGCACCGTCCACTTGGAATGCACCGACAGTCCGCATTCGTTGCGAAAGAAATTCCGCTTCAGCAGCCAGCTTAATCAGACTGTTCCAGAATCTGTGATCAATCTGAAACAACAGAAACCAACATCGAACAATGATTCCACGATATCGGGGAAATCAGTCAATCTAACCGCTACAACGAACAACAATGAATCGGGCTTTGTCGATGCCAGCAGTAGCCATGTTCTGAATACATCCGTTTCGTCGGCAACATCATCGGCATCGTCATCGTCATCGCCGACATCATCTTCGGCGGCATCACCATCCGCCAGCAATAATGCCATTTCGAGTCCCGAATCGGGCCTGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTATCGGCGACACCGCATGAATTCACCAATCACATACGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTATCATCTGCCTCGTCACTGGATCGACACGTTCTGGTGCACACTGGTGAGCGACCTTTCAACTGCAAATATTGCCAACTAACATTCACCACAAATGGCAACATGCACCGTCATATGCGTACACACAAACAGCACCAACAGCACTATCATCGAAACTCAAAGGGTGGCGGTGGTGGTGTTGCAGCGGCAACGGCTGCTAATGGTAGCTCCAGCATGATACCCAATCTAGCATCAAACGACCAATCATCGGCTACAGCGACGACAACAGTGCCCTCCAAACCGACAAACACCAGCAATGGTGTCGTCATCAACAGCAATGGTGACACTATTGGAGGTGGTGGTGGCGAAAGCTACGAAAGTGATGGTGGTTGCTCAACGGATTCATCGAGTGCCATCAGCCAAAGTTCCAATAACAATAACAACAGCAATACCAACAACAAAAACATTAGCAATTTCAAACGCAAGAGCACCGACAGCTTGGATGACATGGCCATGATGAAGCGACGCGTGAAGACCACCATCAACAACAACAACAACATCATCGATAATAATATGCACACCGTTGTGGAGAAGTGTGGTGCCATCGAGGAGACTGATGAAGACATCAAACAGAAACAACAACAACAGCAGAAGCTCTTTTGTCCAGTGTGTAATCGCAATGATTTTGTGGGGATGCTCGCGTTGGGCGCCCACATGGATTGCGAACATTCGGATATACCAGCAAAGTGCCGCCATTGTGACGTTGTCTTTAAGACCCACAAACAGCTCAATGTCCATCCGTGCACGTCCATCATGCATGGGTTTAAGGACCTCACCTTCGTGGACTTCACCAGTGAAAAGTTCCCGCTAATCGCAAAGTCGCTGTGTGAACAGAGTCTGCGCACCCCAGTCAGTAGTCAGAAGTTCGAGTGCGCCAAGTGTTATAGGGCCTTTCCATGCGCCAGTGCGGTCGAGATTCATGAAAAAGAATGCGAAGCCTCGAAATCGTCGTTGTTTGTCGATGCTCATGACTTTTCTATACGCAAACGGCGTTCGTACAGCGAAAGTTCGGGCGGCGCTGATGATGACGAGAATCGGCGCGAAGAGTTCTTTGCGCGTTTGTATCTGAAGAACAAGTCGACTGCACAAAGTATGACAAGTCTTTCACTGTCCTCGCCTTCTTTGTCTGACGTGAAGTCATCTGAGCTGGAGAAGACCCCAGTCAAGATGGACCAATACCATGACTCAAAAGAATTGGCCGACATTCAATCCATCCTCAACATAACCTCATCATCATCGACTAGCAATTTCCTGCGCAACTTTGAAAACTCAGTGAACACACCGATCAGCAATTATGGCGCCGAAAATGGTGAAGAAGAGGCACAGGATGCATTCACCTCCGAGTTTCGCAAGATGAAGCTGCGAGGTGAGTTCCCTTGCAAATTGTGCACAGCAGTATTCCCCAATTTGCGAGCACTAAAAGGCCATAATCGCATTCATCTCAGCGCTGCCGGTCACGGTCCATATCGGTGCAATATGTGCACATATTCCATCCACGATAAGGCAGCACTTGTCCGTCATATGCGTACCCACAATGGTGATCGGCCTTACGAGTGCGCCATCTGCAACTACGCTTTCACTACGAAAGCCAATTGTGAGCGGCACCTGCGCAATCGTCATGCAAAGACAACACGCGATGAGGTTAAGCGCGCTATTATATACCACCCTTCTGAGGACTCCAACTGCGACGATGCAATGAAGAAGCTGCATATGTTCTCGTCCCCCGAATTCGATCAGGACGATTTGGAACAACACCATCCGCCAAAGGATCGTTCCACTCCAGTGTCGCATTTGAAGGAAATGCTTCAAGCCGAGTCGAAACCGATCAAGATTCAAGTCAAGAGCTTGGAAAAGCTGATCGATAAAGCGACACCATCCTTCAATCAGTCCAACGAAGTCGAGAAGGAGCACGATGTAGAAGAATCGCATAACGACAAAGGCAGCCGTCCAATAGACCTCAGCATGGATGTTCTAGACCTGAGCAAAAAGTCAGTGAAGCCACCTAAAATGGCAGAGAAACCCCAACAAGCTCCGTCACCAGCGCAAGCTCCACCTGTCCGCCCTCAAGCGGACGATCAAAGCATCGAAATGCGAGTTTTGGAAAAGAACCAACAGCTCCTGCTTGCTCAACAGCGATTACTAAACGAGGCTATGCCAAAGATGGACCCCGCACATTATTTCCAACTTTCTCAGCTCTACCGGAATCTGGTGTTCCAGCCGCTGAACCCGTTCTTCATGCCAAACTCATTCCTTTCAAACAACATCAGTGACATGAGCAAATTCGCACCACTGATGAATCCACTTTTCGAACATGCTACTGCGGGGGAGACCTCTAATAATAACCAAGCCCAAACCCAGCCAAAGTCAGCTGTCCCAGAAGAGGCCAATCTAATGATGAAGCAGTCGAACCCGCGTGCCCACTCGCCAACTCCTGCCAAGAGCCAATTGATTCCACGCAACCTCACCCCGACTCAAATGTCGCCTATGCCGCGAAGTCATCAACACATGGGCTCCATGCCAGGATCACATTCCTCGGGAATGCTGCCTTCATCGGTGAACAACAACGGCCCTGTAAAGATGGTTATCAAGAACGGTGTCCTGATGCCAAAGCAAAAGCAACGTCGTTACCGTACCGAACGCCCATTTGCCTGCGAACACTGCTCCGCTCGCTTCACCCTGCGCTCGAACATGGAACGCCACATCAAGCAGCAACATCCCCAGTACTGGGCTCAGCGCCAGCGAAGCGGTCACCACATTATGCGCGGACGTACCAACAGCTCGTCGGTCATGTCTCACATGCAATCGTCGCATTCTCCCCTGGAAGCTGCTCACCCAATTAACAGCACTGGGATGATGACCAACCCGCTGAGTGCCATCTCAGATCAGGTGAAATATGCCATTCTCGCTCAGCAGCTCAAGGCGCGTAAGGAAACCGACTATCTGCAGCAAGCTCTGTCCCAAGGCTCAAGTAGCGTTCTAAATCAGAACTCAACCTCTGCTATCAGCAATCTTCGCAAATCGCTCAGTTCTTCGTCGAACACAAACAATGGCAGTATAGAGGACGATGATCCAAAACTTGTCATCGACGAGGACGACGAAAAGGACGAAGACGATGAAGAGGAGGAGGACGAGTTCGAAGACCGCAAGCCTGAGAATTTGACAAAAATCCAGGATCTCCAAGAACAGGGAGCTAACGAGGCAGCTAAAAAGGTCGCCGAGTCAATCCTCGAGCAGGCGATGAAAGCCGGCACCATCAAGAACTTCAGCGCGTCGAATCCAACCGATGAGGAGCGCCCAAAAGATTTCGGCCTCAAGCTGTCGAAGAACATGATTGCTCAAGCGGAGTCTGTGGGAAAATTCCTAAAAGAAGTCGCCAGTTCGCCATTCAAAGACGAGTCGAATGACCTCGCATCGGTGTCGAGACTCGTTGACAACGCCACTAATTCCATGTCCTTCAACAACTACTTTCGACCCAGTGATGTTGTCGATCAAGCCGAACAAAGTGACGAAGAAGGTCTGGTAGCATCAGGCAGCGCATCGGAAAGTAACAACTCCGGTCCTGAAGATATGCCTGGATCTTTGGAACCGAAAAAGAAATCAGCCTACAGCTCTGCGCCAAATCGTGTCTCGTGTCCATATTGCCAGCGCATGTTTCCCTGGTCTAGCTCATTGCGGCGTCATATTCTCACACATACCGGCCAAAAACCCTTCAAATGCTCCCATTGCCCACTGCTGTTCACCACCAAGAGCAATTGCGACCGCCATCTCTTGCGCAAGCATGGAAATGTCGAATCAGCTGTGTCATTGTATGTCCCCATTGAGGATGTTAACGAACCCATGCCGGTGCCCAAGTCTGTCGAAGAGATTGAACTCCAACACCAACAACAGCTGCAGCAACAACGCGAGCAGAAGAAACTGGAAGAGCAAAGGGAATTGGAGAAACACCATCTCATCCAACCAAAGCAGGAGTGCTTGGATCAAGCACCAACACCAACGACCATCAGTACAGTGTGCAAAGTCGAACCAGCGCCACAGATAGTCTCGTCATCGGAGTTGCCATTCAAGTGTCACCTCTGCGACAGTTCGTTCGCCGAGCGGCTGCAGTGCCTCGATCACATTAAGATCCATCATACCCAGGAATTTGCTCTGCTCTTGTCAAAAGGCGCCATCGACAGCGAAGCCGATGTCAACAGCCAAGTCCAGTCGACCGAAGATGATGAGAAGCGCGATGAAAGTCGTGGCAAATACCCGGACTACACCAACCGCAAGGTGATTTGTGCGTTTTGCGTGCGTCGCTTCTGGTCAACGGAAGATTTGCGTCGTCACATGCGCACTCACTCTGGCGAGCGGCCATTTCAATGCGACATCTGTTTGAGAAAGTTCACCCTGAAGCATAGTATGCTGCGTCACATGAAGAAGCACAGCGGCGGTGGTCATTCTAGCAACGGTGCAGCCAACGCTGCTAATAGTGGGTCGGATATGTCCGATGATGAACAGGCGCCATCCACTGCAATGTTGGCAACTACCCTACGCAACCACAAGCTCCAGGAGCTGTTTTCGAAGGCGAACAGTGAATGGCGCAACAGTCGGTTGTCCGGTGAGCACAAGGAAAACATCGAAGAGCACAACAACCAGTCCGATCTCATTGGCAACCTACTAGGCATCAGCGATCAAGGGATTCTCAATAAGCTCCTATCATCGGCTGATGAGGCGGCTAAATTTTTGGGAGTAGATAAGTAG
Protein Sequence: MLKTSIKKQLPDIPMRKMDRRDSTTSDSSVEPMDLGRTPEIKKEITPALQMPTAATLKDAILSDANTKYTTRHESDADESDDNNKDHDHHHQRRSHSQHHYHHRRRAGNSGRDKRTVHLECTDSPHSLRKKFRFSSQLNQTVPESVINLKQQKPTSNNDSTISGKSVNLTATTNNNESGFVDASSSHVLNTSVSSATSSASSSSSPTSSSAASPSASNNAISSPESGLGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSKGGGGGVAAATAANGSSSMIPNLASNDQSSATATTTVPSKPTNTSNGVVINSNGDTIGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNNNIIDNNMHTVVEKCGAIEETDEDIKQKQQQQQKLFCPVCNRNDFVGMLALGAHMDCEHSDIPAKCRHCDVVFKTHKQLNVHPCTSIMHGFKDLTFVDFTSEKFPLIAKSLCEQSLRTPVSSQKFECAKCYRAFPCASAVEIHEKECEASKSSLFVDAHDFSIRKRRSYSESSGGADDDENRREEFFARLYLKNKSTAQSMTSLSLSSPSLSDVKSSELEKTPVKMDQYHDSKELADIQSILNITSSSSTSNFLRNFENSVNTPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGHGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDLEQHHPPKDRSTPVSHLKEMLQAESKPIKIQVKSLEKLIDKATPSFNQSNEVEKEHDVEESHNDKGSRPIDLSMDVLDLSKKSVKPPKMAEKPQQAPSPAQAPPVRPQADDQSIEMRVLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVFQPLNPFFMPNSFLSNNISDMSKFAPLMNPLFEHATAGETSNNNQAQTQPKSAVPEEANLMMKQSNPRAHSPTPAKSQLIPRNLTPTQMSPMPRSHQHMGSMPGSHSSGMLPSSVNNNGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRTNSSSVMSHMQSSHSPLEAAHPINSTGMMTNPLSAISDQVKYAILAQQLKARKETDYLQQALSQGSSSVLNQNSTSAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKDEDDEEEEDEFEDRKPENLTKIQDLQEQGANEAAKKVAESILEQAMKAGTIKNFSASNPTDEERPKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVVDQAEQSDEEGLVASGSASESNNSGPEDMPGSLEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPMPVPKSVEEIELQHQQQLQQQREQKKLEEQRELEKHHLIQPKQECLDQAPTPTTISTVCKVEPAPQIVSSSELPFKCHLCDSSFAERLQCLDHIKIHHTQEFALLLSKGAIDSEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGGHSSNGAANAANSGSDMSDDEQAPSTAMLATTLRNHKLQELFSKANSEWRNSRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_01301175;
80% Identity: -