Hhel001011.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Helleia helle
Gene Symbol
-
Assembly
GCA_963853865.1
Location
OY971414.1:16263071-16263565[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-14 3.9e-11 43.3 0.2 2 37 16 52 15 58 0.89

Sequence Information

Coding Sequence
ATGGTACGGAAATACGAAAGAATGAGCGGACGACAATCTTGGAACGAAGAAGAGATGGCGAGAGCCGTAGCAGCCGTTGTCTCTGGTAAAATGGGCTACAAACTAGCCGCCAGGACATTCCATATACCGCGGTCAACTCTCCAAAGACGAGCGAGCAAAATACGTTACCAGCAACCAGATGACCCCAAACCAATGATGGGGCAGTACAGGCGGGTTTTTACAGAAAGCCAAGAAAAAGATTTAGTAGGCTATAttaagagtatggaaaaatattttatggggGTATCGAGGAGGGATATCAGAGAACTTGCCTTTCAATATGCTGAGGATAATAACTTAAACCATCCATTTGACGTGAATGCTCGTATGGCTGGCGAAGACTGGGTAAGAAATTTCTTAAAGAGAAACCCTGAACTACTCCATAGGTCAGATAAGGAGTATGATTTAGAGCCGGTCAACTTCGACCAATTTTATCATTTCATGTGTCAATCATGA
Protein Sequence
MVRKYERMSGRQSWNEEEMARAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKIRYQQPDDPKPMMGQYRRVFTESQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDVNARMAGEDWVRNFLKRNPELLHRSDKEYDLEPVNFDQFYHFMCQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00261771; iTF_00942733; iTF_00777332; iTF_00925653; iTF_00039713; iTF_01085063; iTF_00041705; iTF_00040718; iTF_00043411; iTF_00042548; iTF_01360545; iTF_01525859; iTF_00036548; iTF_01092996; iTF_00124166; iTF_01093958; iTF_01094824; iTF_00037705; iTF_00622729; iTF_00924521; iTF_01439817; iTF_00726218; iTF_00363948; iTF_01339948; iTF_00071309; iTF_00122285; iTF_01338509; iTF_00121326; iTF_00237390; iTF_00448942; iTF_00172655; iTF_00758063; iTF_00745552; iTF_00123281; iTF_01440915; iTF_00147220; iTF_00425300; iTF_00906038; iTF_00120410; iTF_00831098; iTF_00907802; iTF_01246747; iTF_00375100; iTF_00906975; iTF_01526943; iTF_00038624; iTF_01152000; iTF_01025957; iTF_00274369; iTF_00809985; iTF_00049826; iTF_00281058; iTF_00300098; iTF_00823842; iTF_01491810; iTF_00636197; iTF_01075302; iTF_00809031; iTF_00908743; iTF_01192551; iTF_00301096; iTF_00302024; iTF_00685352; iTF_00928586; iTF_01361514; iTF_00441419; iTF_00072108; iTF_00711756; iTF_01264332; iTF_00637421; iTF_00851693; iTF_01030125; iTF_00282192; iTF_00345744; iTF_01197648; iTF_01435984; iTF_01424977; iTF_00706866; iTF_01362387; iTF_01363028; iTF_00018101; iTF_00973685; iTF_01230453; iTF_00404630; iTF_00822838; iTF_00850550; iTF_01027223; iTF_00157144; iTF_00709112; iTF_00723898; iTF_01029146; iTF_01332474; iTF_00450043; iTF_00771803; iTF_01285467; iTF_00383548; iTF_00888156; iTF_01166524; iTF_01342140; iTF_00677469; iTF_01502013; iTF_00794270; iTF_00273535; iTF_01028191; iTF_01076320; iTF_01260032; iTF_01062730; iTF_00447043; iTF_01063691; iTF_00445038; iTF_00446031; iTF_01064560; iTF_01031057; iTF_01061809; iTF_01532949; iTF_01531894; iTF_01533847; iTF_01534719; iTF_00818284; iTF_00044385; iTF_00155233; iTF_00195105; iTF_00634241; iTF_00663009; iTF_00680449; iTF_00790177; iTF_01147329; iTF_01148033; iTF_01158625; iTF_01170497; iTF_01203969; iTF_01367617; iTF_01529121; iTF_00022722; iTF_00025186; iTF_00666434; iTF_00774434; iTF_00780962; iTF_00781762; iTF_00796450; iTF_00953442; iTF_00960098; iTF_01172258; iTF_01402658; iTF_00007939; iTF_00012867; iTF_00171683; iTF_00212355; iTF_00327011; iTF_00361539; iTF_00377027; iTF_00826755; iTF_01017667; iTF_01182595; iTF_01452259; iTF_00027684; iTF_00390308; iTF_00832836; iTF_00934660; iTF_01145220; iTF_01429860; iTF_01496484; iTF_01538660; iTF_00256773; iTF_00772805; iTF_00832837; iTF_00951717; iTF_00952613; iTF_00954341; iTF_01083237; iTF_01091621; iTF_01494245; iTF_00074406; iTF_00166854; iTF_00180390; iTF_00204294; iTF_00247974; iTF_00700934; iTF_00702822; iTF_00778694; iTF_00819078; iTF_00836454; iTF_00858470; iTF_00931142; iTF_01245862; iTF_01415750; iTF_00407495; iTF_00410215; iTF_00448071; iTF_00782567; iTF_00146312; iTF_00159752; iTF_00341256; iTF_00651656; iTF_00673416; iTF_00683240; iTF_00785928; iTF_00795624; iTF_00874376; iTF_01119240; iTF_01135688; iTF_01203176; iTF_01220584; iTF_01331368; iTF_01341064; iTF_01438824; iTF_00009929; iTF_00144489; iTF_00267113; iTF_00277289; iTF_00284457; iTF_00364841; iTF_00430569; iTF_00433065; iTF_00649033; iTF_00697257; iTF_01208041; iTF_01217417; iTF_01282153; iTF_01501033; iTF_01509513; iTF_00075402; iTF_00076394; iTF_00249642; iTF_00433066; iTF_00640202; iTF_00660234; iTF_00810922; iTF_00821706; iTF_01018506; iTF_01437898; iTF_01443754; iTF_01494986; iTF_00687819; iTF_00777931; iTF_00856523; iTF_01204811; iTF_01302219; iTF_01335851; iTF_00119532; iTF_00177036; iTF_00279052; iTF_00461484; iTF_00632684; iTF_00695404; iTF_01041676; iTF_01209132; iTF_01316236; iTF_01425868; iTF_00288781; iTF_00357357; iTF_00657069; iTF_00658285; iTF_00825517; iTF_00876077; iTF_01079821; iTF_01081517; iTF_01248013; iTF_00206926; iTF_00403694; iTF_00418894; iTF_00779438; iTF_00878798; iTF_00959342; iTF_01016526; iTF_01071566; iTF_01151150; iTF_00000239; iTF_00006223; iTF_00125071; iTF_00462319; iTF_00682287; iTF_00704879; iTF_00785135; iTF_00819983; iTF_00947823; iTF_01157583; iTF_01463183; iTF_00001104; iTF_00287984; iTF_00406640; iTF_00689328; iTF_00737392; iTF_00751952; iTF_00889104; iTF_01084176; iTF_01129968; iTF_01133648; iTF_01280112; iTF_01528208; iTF_00021265; iTF_00033745; iTF_00063505; iTF_00186065; iTF_00289553; iTF_00358449; iTF_00638577; iTF_00647921; iTF_00662161; iTF_00701873; iTF_00720145; iTF_00771025; iTF_01078129; iTF_01080657; iTF_01156209; iTF_01279185; iTF_01317201; iTF_01386641; iTF_00352978; iTF_00761554; iTF_00791122; iTF_00835474; iTF_00840242; iTF_00895826; iTF_00923538; iTF_00932338; iTF_01125394; iTF_01140146; iTF_01336754; iTF_01387538; iTF_01428978; iTF_00354003; iTF_00419699; iTF_00457939; iTF_00468115; iTF_00681587; iTF_00744531; iTF_00775955; iTF_00958611; iTF_01118195; iTF_01206483; iTF_01251667; iTF_01281235; iTF_01436947; iTF_01490067; iTF_01502899; iTF_00017268; iTF_00156180; iTF_00185236; iTF_00250388; iTF_00318036; iTF_00432052; iTF_00457172; iTF_00656020; iTF_00686260; iTF_01124532; iTF_01251668; iTF_01377396; iTF_00035573; iTF_00114037; iTF_00197301; iTF_00235797; iTF_00649941; iTF_00661205; iTF_00698197; iTF_00703861; iTF_00722965; iTF_01072373; iTF_01148757; iTF_01149525; iTF_01221429; iTF_00026774; iTF_00034614; iTF_00112438; iTF_00236566; iTF_00321526; iTF_00405846; iTF_00420470; iTF_00700022; iTF_00775190; iTF_00933654; iTF_00971158; iTF_01115638; iTF_00072663; iTF_00621943; iTF_00642263; iTF_00787543; iTF_00801719; iTF_00871223; iTF_01139543; iTF_01146135; iTF_00205048; iTF_00409208; iTF_00696408; iTF_00926520; iTF_01020152; iTF_01143768; iTF_01173208; iTF_01358808; iTF_01507992; iTF_00411353; iTF_01021113; iTF_01359641; iTF_01416697; iTF_01507097; iTF_01561945; iTF_00149306; iTF_00164250; iTF_00428026; iTF_00659386; iTF_00705914; iTF_00783354; iTF_00834554; iTF_01082362; iTF_01152954; iTF_01154938; iTF_01161242; iTF_01193530; iTF_01464090; iTF_01487642; iTF_00055323; iTF_00824635; iTF_00837403; iTF_00844251; iTF_00875227; iTF_00896699; iTF_00913531; iTF_00922811; iTF_00957883; iTF_00984955; iTF_00985915; iTF_01134715; iTF_01141595; iTF_01451387; iTF_01506267; iTF_01564507; iTF_00008828; iTF_00111548; iTF_00148412; iTF_00187068; iTF_00428924; iTF_00843420; iTF_00859388; iTF_00970332; iTF_01073532; iTF_01117116; iTF_01178332; iTF_01180252; iTF_01333660; iTF_01503772; iTF_00011869; iTF_00467357; iTF_00710941; iTF_01140861; iTF_01219709; iTF_01312157; iTF_00255742; iTF_00325310; iTF_00342142; iTF_00412446; iTF_00421278; iTF_00621150; iTF_00699102; iTF_00736542; iTF_00776670; iTF_01143038; iTF_01176126; iTF_01495710; iTF_00007007; iTF_00032831; iTF_00205983; iTF_00382495; iTF_00780191; iTF_00784319; iTF_00960863; iTF_01099775; iTF_01334687; iTF_00143008; iTF_00247104; iTF_00290592; iTF_00408320; iTF_00855808; iTF_01142336; iTF_01171392; iTF_01181824; iTF_01337696; iTF_01542881; iTF_01544801; iTF_01546565; iTF_01543818; iTF_01545680; iTF_01561056; iTF_00150403; iTF_00077414; iTF_00207818; iTF_00208777; iTF_01401204; iTF_01222410; iTF_00935602; iTF_01090611; iTF_01388391; iTF_00276212; iTF_00827894; iTF_00887337; iTF_01547449; iTF_00323418; iTF_01179432; iTF_00909658; iTF_00806619; iTF_01569236; iTF_00177997; iTF_01403364; iTF_00275178; iTF_00994291; iTF_00674228; iTF_00356059; iTF_00355018; iTF_00198045; iTF_00161470; iTF_00162461;
90% Identity
iTF_00457172;
80% Identity
-