Xxan036462.1
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- -
- Assembly
- GCA_905147715.1
- Location
- LR990655.1:7794260-7794757[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-14 1e-10 43.1 0.1 2 37 16 52 15 58 0.89
Sequence Information
- Coding Sequence
- ATGGTCAGAAGATACGAAAGAATGAGTGGACGCCAGTCCTGGAACGAAGATGACATGGCCAAGGCTGTCGCCGCAGTGGTGTCAGGAAAGATGGGGTACAAGCTGGCCGCCAGGACCTTCCACATACCTCGCTCAACCCTCCAAAGACGCGCTAGCAAGATAAGGTACCAGCAGCCAGACGACCCCAAACCATTAATGGGCCACTACCGGAGGGTGTTCACAGATAGTCAAGAGAAAGACTTAGTCGGATACATTAAAAGCATGGAAAAGTATTTTATGGGAGTCTCAAGGCGAGATATTCGGGAATTAGCTTTCCAGTACGCAGAAGACAACAATCTCAATCATCCATTTGACGTCAACACCCGAATGGCTGGCGAAGACTGGGTTAGGAACTTCCTGAAGAGGAATCCTGAACTCCTGGACAAGTCAGACCATGAGAGCGCCATGGAGCCCGTGAACTTTGACCAGTTCTATCACTTTATGTGTCAGCTATCATGA
- Protein Sequence
- MVRRYERMSGRQSWNEDDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKIRYQQPDDPKPLMGHYRRVFTDSQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDVNTRMAGEDWVRNFLKRNPELLDKSDHESAMEPVNFDQFYHFMCQLS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00408320;
- 80% Identity
- iTF_01062730;