Ptra001606.1
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- -
- Assembly
- GCA_963924445.1
- Location
- OZ004337.1:16757600-16758097[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-13 1.8e-11 44.6 0.1 1 42 15 57 15 59 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGAAAATACGAAAGATTGAGCGGTCGCCAGTCCTGGAGTGAAGAGGATATGGCTAAGGCAGTAGCCGCCGTCGTGTCAGGTAAGATGGGCTACAAGCTAGCGGCCAGGACCTTCCACATCCCGCGCTCCACGCTGCAGCGGCGCGCCAGCAAGGTGCGCTACAAGCTACCCGACGACGCCAAGCCGCTCATGGGCCAGTACCGGCGCGTCTTCACCGTCGATCAGGAGAAGGATCTCGTCGGCTACATCAAGAGCATGGAGAAATACTTCATGGGCGTCTCCAGACGCGATATCAGAGAGATCGCATTCCAATATGCTGAAGATAACCAACTCAACCACCCGTTTGATGTCAACAGCCGAATGGCCGGCGAAGATTGGGTCAGAAACTTTCTCAAAAGGAACCCTGAACTGCTTGAAAAGTCAGACCACGAGATGGGACTGGAACCCGTGAACTTCGACCAGTTCTATCACTTTATGTGTCAGTTTTCATGA
- Protein Sequence
- MVRKYERLSGRQSWSEEDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKVRYKLPDDAKPLMGQYRRVFTVDQEKDLVGYIKSMEKYFMGVSRRDIREIAFQYAEDNQLNHPFDVNSRMAGEDWVRNFLKRNPELLEKSDHEMGLEPVNFDQFYHFMCQFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00909658;
- 80% Identity
- -