Dsac008849.1
Basic Information
- Insect
- Diatraea saccharalis
- Gene Symbol
- -
- Assembly
- GCA_014843785.1
- Location
- JACGTY010000872.1:12127-18630[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-14 6.2e-11 42.5 0.1 2 37 16 51 15 57 0.92
Sequence Information
- Coding Sequence
- ATGGTACGAAAATACGAAAGAATGAGCGGGCGACAAGCCTGGAATGAAGAGGACATGGCGAAAGCCGTAGCTGCAGTCGTTTCAGGTAAGATGGGATACAAGCTGGCCGCCAGGACCTTTCACATACCACGGTCCACGCTGCAGCGACGCGCCAGCAAAATCCGCTACCTACATCCTACCGAGACAAAGCCACTAATGGGCCACTATAAACGGGTCTTCACAGAGAGCCAAGAAAAAGATTTGGTCGGGTACATCAAAAGTATGGAGCAGTACTTCATGGGTGTCTCTAGGAGAGACATAAGAGAGTTAGCATTCCAGTACGCTGAAGATAACCAGGTAAACCACCCTTTCGACGTCAACAGCAGAATGGCCGGTGAGGACTGGGTTAGGAACTTTCTGAAGAGAAACCCAGAACTACTACACAAACCGGACAAAGATATGGAGCTGGAACCTGTGAACTTTGACCAATTCTATCACTTCATGTGTCAACTGTCATGA
- Protein Sequence
- MVRKYERMSGRQAWNEEDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKIRYLHPTETKPLMGHYKRVFTESQEKDLVGYIKSMEQYFMGVSRRDIRELAFQYAEDNQVNHPFDVNSRMAGEDWVRNFLKRNPELLHKPDKDMELEPVNFDQFYHFMCQLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00284457; iTF_00035573; iTF_00034614; iTF_01020152; iTF_00382495;
- 80% Identity
- -