Cper004256.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cydalima perspectalis
Gene Symbol
-
Assembly
GCA_951394215.1
Location
OX596202.1:14270270-14270767[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-13 2.8e-11 43.4 0.2 1 37 15 52 15 58 0.88

Sequence Information

Coding Sequence
ATGGTGCGACGATACGAAAGAATGAGCGGCCGCCAGTCCTGGAGTGAAGAGGACATGGCTAAGGCCGTCGCTGCCGTGGTGTCAGGTAAGATGGGCTACAAGCTGGCAGCCCGCACCTTCCACATCCCGCGCTCCACGCTGCAGCGCCGCGCCAGCAAGATCCGTTACCAGCAGCCCGACGAGCCCAAACCGCTCATGGGACACTACAGAAGAGTTTTCACGGACAGCCAGGAGAAAGACTTAGTAGGCTACATTAAAAGCATGGAGAAATACTTCATGGGCGTTTCCAGGAGAGACATCAGGGAACTCGCGTTCCAATACGCTGAAGACAACAATTTAAACCACCCGTTCGATGTGAACAGCAGAATGGCTGGAGAAGACTGGGTGAGGAACTTCCTCAAACGCAACCCCGAGCTCCTGGAGAAGTCGGAGAAGGAGACTGAGCTGGAGCCGGTGAACTTTGACCAGTTCTACCACTTCATGTGTCAGTTCTCATGA
Protein Sequence
MVRRYERMSGRQSWSEEDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKIRYQQPDEPKPLMGHYRRVFTDSQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDVNSRMAGEDWVRNFLKRNPELLEKSEKETELEPVNFDQFYHFMCQFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00786686;
90% Identity
iTF_00007939; iTF_01071566; iTF_00039713; iTF_00041705; iTF_00040718; iTF_00043411; iTF_01147329; iTF_01145220; iTF_01496484; iTF_01494245; iTF_00180390; iTF_01494986; iTF_01129968; iTF_00840242; iTF_01140146; iTF_01115638; iTF_01146135; iTF_01143768; iTF_01140861; iTF_01495710; iTF_00636197; iTF_00951717; iTF_00274369; iTF_00809985; iTF_00300098; iTF_00447043; iTF_01525859; iTF_00036548; iTF_01092996; iTF_00952613; iTF_01025957; iTF_00124166; iTF_01093958; iTF_00809031; iTF_00301096; iTF_00302024; iTF_00685352; iTF_01094824; iTF_01119240; iTF_00037705; iTF_00622729; iTF_00924521; iTF_01439817; iTF_00726218; iTF_00928586; iTF_01062730; iTF_01063691; iTF_00363948; iTF_00711756; iTF_01339948; iTF_00071309; iTF_00122285; iTF_00851693; iTF_01030125; iTF_01338509; iTF_00121326; iTF_00237390; iTF_00445038; iTF_00448942; iTF_00172655; iTF_00446031; iTF_00758063; iTF_00745552; iTF_01064560; iTF_00123281; iTF_01031057; iTF_01061809; iTF_01118195; iTF_01440915; iTF_00147220; iTF_00425300; iTF_00973685; iTF_01230453; iTF_01532949; iTF_00850550; iTF_00906038; iTF_01027223; iTF_01533847; iTF_00120410; iTF_00831098; iTF_00907802; iTF_01029146; iTF_00450043; iTF_00771803; iTF_01246747; iTF_00111548; iTF_00375100; iTF_00888156; iTF_01117116; iTF_00273535; iTF_00906975; iTF_01028191; iTF_01526943; iTF_01534719; iTF_00038624; iTF_00931142; iTF_00821706; iTF_00889104; iTF_01085063; iTF_00651656; iTF_00146312; iTF_00012867; iTF_01220584; iTF_00720145; iTF_00072663; iTF_01331368; iTF_01333660; iTF_00433065; iTF_00433066; iTF_00947823; iTF_00432052; iTF_01491810; iTF_01192551; iTF_01425868; iTF_00345744; iTF_00761554; iTF_01152000; iTF_01360545; iTF_01264332; iTF_00819983; iTF_00819078; iTF_01084176; iTF_00647921; iTF_00935602; iTF_00042548; iTF_01531894; iTF_00236566; iTF_01148757; iTF_01173208; iTF_00323418; iTF_00428026; iTF_00827894; iTF_01154938; iTF_01156209; iTF_01073532; iTF_00621943; iTF_01180252; iTF_01179432; iTF_01503772; iTF_01502899; iTF_01143038; iTF_01158625; iTF_01402658; iTF_00204294; iTF_01157583; iTF_00197301; iTF_01139543; iTF_00957883; iTF_01141595; iTF_01176126; iTF_01337696; iTF_00290592; iTF_00858470; iTF_00341256; iTF_00428924; iTF_01142336;
80% Identity
-