Ibis011239.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- -
- Assembly
- GCA_958496205.1
- Location
- OY292397.1:18961820-18962317[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-14 1.5e-11 44.5 0.2 1 42 15 57 15 58 0.92
Sequence Information
- Coding Sequence
- ATGGTGAGAAAGTACGAAAGATTGAGCGGCCGCCAGTCATGGAGCGAGGAGGACATGGCGAAAGCGGTGGCTGCCGTCGTCTCAGGTAAGATGGGCTACAAGCTGGCAGCACGAACGTTCCACATCCCACGCTCGACGCTGCAACGACGAGCTAGCAAAGTCCGCTACCAACAACCTGATGACCACAAACCTCTCATGGGACACTACAGACGTGTCTTCACTGACGATCAAGAGAAGGACCTCGTCGGCTACATCAAGAGCATGGAGAAATACTTCATGGGAGTCTCAAGGAGGGACATCAGGGAATTAGCTTTTCAATACGCTGAGGACAATCAACTAAACCATCCATTCGATGTAAACAGCCGAATGGCCGGCGAGGATTGGGTCAGGAACTTCTTAAAAAGAAACCCTGAACTTCTCGACCGGTCGGATCACGAGACCAATCTTGAACCTGTGAACTTCGATCAGTTCTACCACTTCATGTGCCAGTTCTCATGA
- Protein Sequence
- MVRKYERLSGRQSWSEEDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKVRYQQPDDHKPLMGHYRRVFTDDQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNQLNHPFDVNSRMAGEDWVRNFLKRNPELLDRSDHETNLEPVNFDQFYHFMCQFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00457172;
- 80% Identity
- -