Pxut011484.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- -
- Assembly
- GCA_000836235.1
- Location
- NW:2302346-2306285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-16 1.6e-12 46.6 0.2 1 43 22 65 22 66 0.94
Sequence Information
- Coding Sequence
- ATGTTCAGTGACATGCTCTCAATGGTCCGTAAATACGAAAGAATGAGCGGCCGTCAGTCCTGGAGCGAAGAGGACATGGCGAAAGCTGTCGCCGCCGTTGTCTCCGGAAAAATGGGCTACAAATTGGCGGCCAGAACGTATCACATCCCGCGCTCAACGCTGCAGCGCCGCGCCAGCAAGGTGCGATACCAGCTACCAGACGACCCCAAGCCCCTCATGGGACACTACAGACGTGTTTTCACTGACAACCAAGAAAAGGACCTTGTCGGCTACATAAAGAGTATGGAGAAATACTTCATGGGTGTCTCCAGACGAGATATAAGGGAACTGGCCTTCCAATACGCTGAGGACAACAACTTAAATCATCCTTTTGACGTAAACAGTCGTATGGCCGGCGAGGACTGGGTCAGAAACTTCCTTAAAAGGAACCCAGAGCTACTGAATAGGTCAGAAAAAGAATACGAACTGGAGCCCGTCAACTTCGACCAATTCTACCACTTTATGTGTCAACTGTCATGA
- Protein Sequence
- MFSDMLSMVRKYERMSGRQSWSEEDMAKAVAAVVSGKMGYKLAARTYHIPRSTLQRRASKVRYQLPDDPKPLMGHYRRVFTDNQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDVNSRMAGEDWVRNFLKRNPELLNRSEKEYELEPVNFDQFYHFMCQLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00457172;
- 80% Identity
- iTF_01148033;