Dpas033924.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- -
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010000274.1:48669-49163[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-15 2.6e-11 44.5 0.4 1 42 15 57 15 59 0.92
Sequence Information
- Coding Sequence
- ATGGTACGAAAATACGAAAGAATAAGTGGACGCCAGTCCTGGAGTGAAGAAGAAATGGCAAAAGCCGTTGCGGCTGTGGTGTCAGGTAAGATGGGATATAAACTGGCTGCCAGAACCTTCCACATACCACGATCAACACTCCAAAGACGCGCTAGTAAAGTACGCTACCAACAAGCAGATGATCCGAAACCATTGATGGGGCATTACAGGCGAGTTTTCACTGACAGCCAAGAGAAAGATCTAGTCGGTTTCATAAAAAGTATGGAACAATATTTTATGGGCGTCACAAGACGAGATATAAGAGAACTAGCATTCCAATACGCTGAAGATAACCACCTTAATCATCCTTTTGATGTTAATGCCAGAATGGCTGGAGAAGATTGGGTGAGAAACTTCTTAAAACGAAATCCGGAACTACTTAACAAATCGGATAAGGAATACGAGCTGGAACCTGTAAACTTCGATCAATTCTATCATTTTATGTGTCAATCATGA
- Protein Sequence
- MVRKYERISGRQSWSEEEMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKVRYQQADDPKPLMGHYRRVFTDSQEKDLVGFIKSMEQYFMGVTRRDIRELAFQYAEDNHLNHPFDVNARMAGEDWVRNFLKRNPELLNKSDKEYELEPVNFDQFYHFMCQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00457172;
- 80% Identity
- -