Apln012638.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- -
- Assembly
- None
- Location
- CADEBC010000540.1:15825466-15825909[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-12 1.5e-09 37.5 0.6 5 37 1 34 1 40 0.88
Sequence Information
- Coding Sequence
- ATGGCCAGGGCAGTGGCGGCTGTCGTCTCTGGTAAAATGGGATACAAGTTGGCTGCTAGAACATTTCACATCCCACGTTCTACACTGCAGAGACGCGCTAGTAAAATCCGCTACCAGCAACCTGATGACCCTAAACCGTTAATGGGCCATTACAGAAGAGTTTTCACAGATAGTCAGGAAAAAGATTTAGTTGGCTATATCAAGAGCATGGAGAAGTATTTCATGGGGGTCTCCAGACGTGATATTCGAGAATTGGCCTTTCAGTATGCTGAAGACAACAACCTAAATCATCCTTTTGATGTAAACGCTAGGATGGCTGGCGAAGATTGGGTCAGGAACTTTTTGAAACGAAACCCAGAACTGCTAGACAAGTCTGATCCGGAGTGTGGCTTGGAGCCTGTGAACTTTGATCAGTTCTATCATTTTATGTGTCAACTGTCATGA
- Protein Sequence
- MARAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKIRYQQPDDPKPLMGHYRRVFTDSQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDVNARMAGEDWVRNFLKRNPELLDKSDPECGLEPVNFDQFYHFMCQLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00457172;
- 80% Identity
- -