Zces009700.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- CM022603.1:2789840-2793690[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-15 8.2e-12 44.5 0.3 1 42 15 57 15 58 0.92
Sequence Information
- Coding Sequence
- ATGGTtagaaaatatgaaagaatAAGCGGACGCTTGTCTTGGAGCGAAGAAGAAATGGCTAAAGCGGTAGCAGCTGTGGTCTCAGGTAAGATGGGCTACAAGCTCGCCGCCAGAACCTTCCACATACCCCGCTCCACACTACAGAGGAGGGCCAGTAAGGTCCGCTATCAACAACCTGACGACCCTAAGCCCCTTATGGGCCATTACAGACGAGTATTCACAGATAGCCAAGAAAAAGATTTAGTTGGATACATAAAAAGCATGGAGCAGTACTTCATGGGGGTCTCCCGAAGAGACATACGCGAGCTAGCATTCCAATATGCCGAggataatcatttaaatcatCCCTTTGATGTCAACACTAGAATGGCTGGCGAAGACTGGGTCAGGAATTTCTTAAAAAGGAATCCCGAGTTATTGCACAAGTCGGAGAAGGAACATGAGCTGGAGCCGGTAAACTTCGATCAATTCTATCACTTCATGTGTCAGTCGTCATGA
- Protein Sequence
- MVRKYERISGRLSWSEEEMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKVRYQQPDDPKPLMGHYRRVFTDSQEKDLVGYIKSMEQYFMGVSRRDIRELAFQYAEDNHLNHPFDVNTRMAGEDWVRNFLKRNPELLHKSEKEHELEPVNFDQFYHFMCQSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00457172;
- 80% Identity
- iTF_00357357;