Pfla002893.1
Basic Information
- Insect
- Perizoma flavofasciatum
- Gene Symbol
- -
- Assembly
- GCA_958496245.1
- Location
- OY292421.1:11920046-11920543[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-15 5.3e-12 45.6 0.1 1 43 15 58 15 59 0.94
Sequence Information
- Coding Sequence
- ATGGTGAGAAAATACGAAAGAATGAGCGGACGCCAATCCTGGAGCGAAGACGACATGGCCAAAGCAGTCGCCGCCGTCGTCTCAGGTAAGATGGGCTACAAGCTGGCGGCCAGAACCTTCCACATCCCGCGCTCGACGCTGCAGCGGCGCGCCAGCAAGGTTCGCTATCAGCTGCCCGATGACGCCAAGCCGCTCATGGGCCAGTACCGGCGCGTCTTCACCGTTGACCAGGAAAAAGATCTGGTCGGCTACATTAAGAGCATGGAGAAATACTTCATGGGCGTCTCCAGGCGCGATATAAGAGAGCTCGCCTTCCAATATGCTGAAGACAACCAACTCAACCACCCTTTCGACGTCAACAGCAGAATGGCTGGCGAAGACTGGGTCAGGAATTTCCTCAAAAGAAATCCTGAACTCCTGGACAAATCAGACAACGAGATGGGACTGGAACCCGTTAACTTCGACCAGTTCTATCACTTTATGTGTCAGTTCTCATGA
- Protein Sequence
- MVRKYERMSGRQSWSEDDMAKAVAAVVSGKMGYKLAARTFHIPRSTLQRRASKVRYQLPDDAKPLMGQYRRVFTVDQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNQLNHPFDVNSRMAGEDWVRNFLKRNPELLDKSDNEMGLEPVNFDQFYHFMCQFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786686;
- 90% Identity
- iTF_00909658;
- 80% Identity
- iTF_01170497;