Pper036315.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pocota personata
Gene Symbol
nfxl1
Assembly
GCA_963082735.1
Location
OY720431.1:28070026-28082661[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 6e+04 -8.1 6.4 15 19 136 140 135 140 0.82
2 20 0.14 4.4e+03 -0.5 0.8 4 10 171 177 170 177 0.95
3 20 2.8e-08 0.00083 21.0 16.6 1 19 185 202 185 202 0.99
4 20 0.58 1.7e+04 -2.4 2.1 5 10 227 232 227 232 0.95
5 20 6e-06 0.18 13.5 12.6 1 19 238 257 238 257 0.96
6 20 1.3 4e+04 -3.5 1.8 6 10 282 286 281 286 0.89
7 20 1.1e-09 3.4e-05 25.5 13.4 1 19 292 310 292 310 0.99
8 20 0.011 3.2e+02 3.1 2.6 5 12 334 341 334 341 0.93
9 20 2e-08 0.00061 21.4 10.2 1 18 345 362 345 363 0.96
10 20 0.35 1e+04 -1.7 0.4 1 5 372 376 372 381 0.74
11 20 2.6e-07 0.0077 17.9 16.9 1 18 397 414 397 415 0.98
12 20 6.8e-08 0.0021 19.8 13.3 3 19 426 442 418 442 0.85
13 20 1.1 3.4e+04 -3.3 0.9 6 10 470 474 469 474 0.89
14 20 0.011 3.2e+02 3.1 10.8 8 18 486 496 478 497 0.86
15 20 0.22 6.5e+03 -1.0 3.9 4 11 511 518 500 519 0.86
16 20 0.32 9.5e+03 -1.6 0.9 6 10 578 582 577 582 0.90
17 20 3.6e-06 0.11 14.3 6.0 1 12 588 599 588 599 0.97
18 20 2 6e+04 -6.1 2.4 15 18 612 615 612 615 0.91
19 20 0.0011 32 6.3 17.4 4 19 629 644 627 644 0.93
20 20 6.8e-08 0.002 19.8 12.7 1 17 695 713 695 715 0.86

Sequence Information

Coding Sequence
atgaattttaaagagatccaaaataaaaacatggaaATGGCAAGAAAAATTACTGAAAACTACGAATCTAGTTCTGATGAGGAACAGCTCGATGGAGGCAAAATCTTAGAAAAATTATACAAGAACTACTCGGGCGGAAATGATCAGCTTCAAAAGACGGCCGCTTTTCTTGAGAATGTTCTGCAATCTGGATCAGCTATATGCCTAATATGCATTGGTTCCGTTAAGAGAGCCGATTCAGTGTGGTCTTGCAAATATTGCTATTGTGTGTTTCATCTTTTGTGTGTTAAACGATGGGCGAACGATAGTATTGCATTATTGAAGGACAAAGGTAACGAAGAGCAGGGCTACTACAATAATTTGGGTGAATTTATTCCGAAGAAGATTAGAGCAGTCAAATGGTGTTGCCCACAATGTCGTCGTGATTACCAACCAAACGAAAGACCAACGCAATACGAGTGCTTTTGTGGGAAAGAAGTCAATCCGCAGATTCAGGATTGGCTTGTACCACATTCGTGTGGCGAAACTTGTGGAAAACCACTGCAACCAGAATGTGGTCACAGGTGTTTGCTACTTTGTCACCCGGGTCCATGCCCTCCATGTCCTCAGAATATAGTAGTAAGCTGTAAATGTGGAAAGTCTCCACCGAAGACACTGCGATGCTTTCAGAAGAGTTGGACATGTGAAAGAAAATGTTCGGAGGTTCTTCCATGTGGAAAGCACAAATGTGATCAGGTGTGTCATGCGCCAAAGCAGTGCCCCGCATGTAGTAAGACAAGTCTTCAGAAGTGTATTTGCGGAAGCGAGGAAGCAATGAGAAGTTGCTCACAACGTGTATGGCAATGCAAGAAGGTTTGTAACAAGAAGTATAGTTGTGGCATTCATAATTGTAAGAGAGTATGTCACGACGGAGAATGCGGAGAGTGCCCCCTGAGCCTGCCAAGGACATGTCCCTGTGGTAAAACGAGAAAGGTTGCACCCTGTAACGAACCAATAGATACTTGTGACGAAACTTGTCACAAGTTGCTCTCATGTGGACAGCACTATTGCAATCAGCGATGTCATAAGGGTGACTGCAGCTTGtGCTTGATTATCACAAAGAAAACATGTCGCTGTGGTATGCACGCGAAAGAGGTACCCTGCTGGAAGGCGTTCTTTTGTGAAACTAAATGCAAAAAGATTCGAGATTGTGGAAAGCACGCTTGCAATAAAAAGTGCTGTGATGGTCAATGCCCACCATGTGATAAGATATGTGGAAAGCTACTATCGTGCAAGAAACACAAGTGCAATTCTGTGTGTCACAATGGTCCGTGTTACCCTTGTAAGTTGAAATCTCAAGTCAAATGTCGATGTGGAACTACATGCGTGACAGTACCTTGCGGTAGAGAACGTAGAGCACGCCTCTCTTGCACAGAACTTTGCAGAGTTCCATCGAAATGCCATcatcaaaacaaacacaaatgcCACAAGGGTGAGTGCCCGTTGTGCAATCAAATATGCGGACTGAAAAACGATGTCACAAATTGCGATCATATCTGCGCAGCTCGTTGTCACGCGGCTGTGCGAGTTCCTCTAAAGCCTTCGAGTACCTCTAATATATTCGACTACAAATTTGAGAATTATGAGACCAAATGTCTACCACATCCGAACTGCGAGAAAAAAGTGATGGTACCCTGTATTGGAGGTCATGAGATTGCCGAATGGCCATGTTGGAACTCTAAGCCAACTTCCTGTCAGCGGTTGTGTGGGCGAATTTTAAATTGTGGCAATCATACGTGTACGCTTGTTTGTCACAGTGTACCTgatataaatgtaaaaaatCAACAGGAAGGCTGTGCTCCATGCGCCGAAGGATGCCAAATCAAACGTCCACCAGGTTGTGTTCATCACTGTAAAAGACCCTGCCACCCAGCTCCATGTGATCCATGTTCggcaacaataaaaacaatgtgTCACTGTAGTCTCTCGCAAGTTTATTTTAAATGCTCGGAATACTATTCCTCAGATGGTACCCCAAGCGAGATCTCAGAACGACAGGAAAATCTAAAATGTTGTGGAAATCGTTGCATCAAAAATTACTCATGTGGTCATCGTTGTTCCTCTGTATGCCACCCGGGACCGTGCCCCAATTCAGAGAATTGccgtaaaaaagtaaaaatgtactGTCTATGTAAGCGTATCAAAACCGAAGTACCCTGTGAGAAGACCCGTTCCTCTGATGTATCCATACCGTGCGATGATAACTGCCTGATGAATAAAGCAGCTCTAGAGGAAATCAAACACCAAGAAGCAGAGAAACAAAGACTTGCCGAAGAAGAACGAAACCGCATTGAATTGGAACAATTCGAGAAAAGATTTGGCAAACGAAAACCTCGAGAACGTCGAGTTATCCCACAAGAAATCAAGAGtaacaacaataaaacaaaGCTATTTGTTACCGTTGCAGTCGTAATAACTGCAGCTGCTTGCTcagctttttatttatatcagtaA
Protein Sequence
MNFKEIQNKNMEMARKITENYESSSDEEQLDGGKILEKLYKNYSGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADSVWSCKYCYCVFHLLCVKRWANDSIALLKDKGNEEQGYYNNLGEFIPKKIRAVKWCCPQCRRDYQPNERPTQYECFCGKEVNPQIQDWLVPHSCGETCGKPLQPECGHRCLLLCHPGPCPPCPQNIVVSCKCGKSPPKTLRCFQKSWTCERKCSEVLPCGKHKCDQVCHAPKQCPACSKTSLQKCICGSEEAMRSCSQRVWQCKKVCNKKYSCGIHNCKRVCHDGECGECPLSLPRTCPCGKTRKVAPCNEPIDTCDETCHKLLSCGQHYCNQRCHKGDCSLCLIITKKTCRCGMHAKEVPCWKAFFCETKCKKIRDCGKHACNKKCCDGQCPPCDKICGKLLSCKKHKCNSVCHNGPCYPCKLKSQVKCRCGTTCVTVPCGRERRARLSCTELCRVPSKCHHQNKHKCHKGECPLCNQICGLKNDVTNCDHICAARCHAAVRVPLKPSSTSNIFDYKFENYETKCLPHPNCEKKVMVPCIGGHEIAEWPCWNSKPTSCQRLCGRILNCGNHTCTLVCHSVPDINVKNQQEGCAPCAEGCQIKRPPGCVHHCKRPCHPAPCDPCSATIKTMCHCSLSQVYFKCSEYYSSDGTPSEISERQENLKCCGNRCIKNYSCGHRCSSVCHPGPCPNSENCRKKVKMYCLCKRIKTEVPCEKTRSSDVSIPCDDNCLMNKAALEEIKHQEAEKQRLAEEERNRIELEQFEKRFGKRKPRERRVIPQEIKSNNNKTKLFVTVAVVITAAACSAFYLYQ