Ecor001473.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupeodes corollae
Gene Symbol
nfxl1
Assembly
GCA_945859775.1
Location
CAMAOS010000018.1:791811-797048[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3.2e+04 -8.1 6.4 15 19 169 173 168 173 0.82
2 20 0.15 2.4e+03 -0.5 0.8 4 10 204 210 203 210 0.95
3 20 4.5e-08 0.00072 20.3 12.8 1 18 218 234 218 235 0.98
4 20 1.1 1.8e+04 -3.3 1.1 5 10 260 265 260 265 0.93
5 20 1.2e-06 0.02 15.8 13.2 1 19 271 290 271 290 0.93
6 20 1.4 2.2e+04 -3.6 1.8 6 10 315 319 314 319 0.89
7 20 1.6e-09 2.6e-05 24.9 14.4 1 19 325 343 325 343 0.99
8 20 0.51 8.4e+03 -2.2 1.4 5 10 367 372 367 372 0.95
9 20 3.6e-08 0.00058 20.6 10.0 1 18 378 395 378 396 0.96
10 20 0.31 5e+03 -1.5 0.4 1 5 405 409 405 414 0.75
11 20 2.3e-05 0.37 11.7 15.3 1 18 430 447 430 448 0.98
12 20 2.7e-08 0.00043 21.1 13.0 3 19 459 475 451 475 0.85
13 20 1.1 1.7e+04 -3.2 0.6 5 10 502 507 502 507 0.78
14 20 0.00067 11 7.0 11.3 8 19 519 530 511 530 0.87
15 20 0.23 3.8e+03 -1.1 4.9 3 11 543 551 533 552 0.84
16 20 0.33 5.3e+03 -1.6 0.9 6 10 610 614 609 614 0.90
17 20 8.2e-06 0.13 13.1 6.1 1 11 620 630 620 631 0.96
18 20 2 3.2e+04 -6.9 3.8 1 7 644 648 644 651 0.51
19 20 0.0003 4.9 8.1 14.5 4 18 661 675 659 676 0.93
20 20 1.5e-06 0.025 15.4 13.7 1 18 724 743 724 744 0.89

Sequence Information

Coding Sequence
ATGGCTTCTAACATTTCCAAAGCAAACAAACCAAAAAATGTCCCTTCCAGCACAAGTAATAGAAAACCAGAAAACCCCAATAAGTCGCAACAACAATCAAAAAAATTCAAAGATATTCAAAATAAAAATATGGAAATGGCTAAGAAAATTACAGAAAACTATGAGTCCAGTTCTGATGAAGAAGAACTCGATGGTGGAAAAATCTTGGAAAAATTATACAAAAACTATACTGGTGGGAATGATCAACTGCAAAAGACTGCAGCTTTTTTGGAAAATGTTTTACAATCAGGATCTGCAATATGCCTAATTTGCATTGGTTCGGTGAAAAGAATGGATGCAATTTGGTCTTGCAAGTTTTGCTATTGTGTGTTCCATTTGAATTGCGTAAAGCGATGGGCAAACGATAGTATTGCATTACTTAAAGACAAGGGCACCGAAGAGCAAGGATATTATAATAATTTGGGTGAATTCATTCCGAAAAAGGTAAAAGCTGTGAAGTGGTGTTGTCCACAGTGTCGACGGGACTATCAACCCCAAGATAGACCAACTCAATATGAGTGCTTTTGTGGAAAAGAAGTTAATCCTGTCAATCAGGAATGGATAGTTCCACATTCTTGTGGGGAGACTTGTGGCAAACCATTACAACCTGAATGCGGTCACATGTGTATGCTTCTGTGTCATCCTGGTCCATGTCCTCCCTGTGCTCAAAGCATATTTTCAAGTTGCAAATGTGGAAAATCCCCACCGAAAACTCTTCGTTGCTTCCAAAAAACCTGGACATGCGATCGGAAATGTTTGCAGGTTCTTCCTTGTGGCAAACACAAATGTGATCAAGTTTGTCATTCGGCTAAACAATGTCCCCCTTGCAGTAAGTCTAGTCGTCAGAAATGCGTTTGTGGCAATGAAGAGGCCATGAAAAACTGCTCCCAGAGAATCTGGCAATGTAAGAAGGTGTGCAACAAAAAATATAGTTGTGGTATTCACAGTTGTAAACAAGTTTGTCATGATGGACCATGCGGCGATTGTCCACTTAGCCTTCCAAGATCTTGTCCATGTGGAAAAACTAGGAAAACAGCACCTTGCAACGAACCCATCGATACTTGTGAAGACACTTGCTACAAGTTGCTCTCGTGTGGAAAACACTATTGTACCCAACGTTGTCATAAAGGCGATTGCAGCTTGTGCTTAATTGTGACGAAAAAAACATGTCGCTGTGGTATGCACGAAAAAGAGTTACCTTGTTGGAAAGCATTCAGCTGTGAGACAAAATGCAAGAAGATCCGAGACTGTGGAAAACATGCTTGTAATAAAAAGTGCTGTGATGATCAATGTCCACCGTGTGATAAGGTATGCGGAAAATTGTTGTCTTGTAAAAAGCACAAATGCAGTTCAGTTTGTCACGATGGTCCGTGTTATCCTTGTAAGTTACAATCTCAAGTTAAATGTCGATGTGGAAGTACTTGCATTACGGTGCCCTGTGGTAGAGAGCGTAGAGCTCGTCCTAATTGTATGGAACCTTGCAGAGTTCCTTCTAAATGTCATCACCAAAATAAACATAAATGTCACAAAGGCGATTGTCCATCATGCAGTCAAGTGTGTGGATTGAAAAATGACACCACCAATTGTGAACACTTGTGTTCAGCTCGTTGTCATGCTGCTGTTAAGATTCCTCTCAAAAATAACCCTAACAATATATTTGAGTATAAATTCGATAATTATGAAATCAAACAAATGCCACATCCAAAATGTGAGAAGAAGGTTATGGTTGCCTGTATTGGTGGCCACGAGATTGCCGAATGGCCATGTTGGAATTCTAAGCCAACATCATGTCAACGTCTTTGTGGTCGCAATTTGAAATGTGGCAACCATAAGTGCTCACTCGTTTGTCACAATGTAACTGATCCCGATGATAAAAATGAGCAAGAAAGCTGTGGATCATGCATAGAAGGATGTGAAGTTAAACGACCTCCAGGATGTGTTCATCGTTGCAAGAAATCTTGTCATCCACCCCCATGCGACCCATGTCTTGCACAAATCAAAGCAAACTGTCATTGTGGCCTAACGCAGGTTTATTATAAGTGTTCTGAATATTATTCAACTACCATGGACATTGAAGAACGTCAAGAAAAATTGAAGAGTTGTGGAAATCGTTGCATTAAAAATTACCCATGTGGTCATCGTTGTTCAGCTGAATGTCATTCAGGGCCCTGTCCAAATCCACAAAGTTGTCGTAAGAAGGTGAAAATCTATTGCGAATGCAGGCGCATCAAAATGGAAGTCACATGTGAGAAATCCCGATCGAAAGACACTTTCATACCGTGCGATGATGTGTGTCAAGTCATCAAAGCCGAATCGGAAAAAATCAAACGCGAAGAAGCAGAAAAACAAAGACTTGCCGAAGAGGAACGCAATCGCATTGAATTGGAACAATTTGAAAAGAGATTTGGTAAACGAAAACCAAGAGAACGTAAAGTTATTGCACAAGAAGTAAAAACAAACAACAATCAAATGAAATTGCTGATTGGCAGTGCAGCTGCTATTGTGGTAGCTGCAGTGGTAATCTTTTATTTTTATTTATAA
Protein Sequence
MASNISKANKPKNVPSSTSNRKPENPNKSQQQSKKFKDIQNKNMEMAKKITENYESSSDEEELDGGKILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRMDAIWSCKFCYCVFHLNCVKRWANDSIALLKDKGTEEQGYYNNLGEFIPKKVKAVKWCCPQCRRDYQPQDRPTQYECFCGKEVNPVNQEWIVPHSCGETCGKPLQPECGHMCMLLCHPGPCPPCAQSIFSSCKCGKSPPKTLRCFQKTWTCDRKCLQVLPCGKHKCDQVCHSAKQCPPCSKSSRQKCVCGNEEAMKNCSQRIWQCKKVCNKKYSCGIHSCKQVCHDGPCGDCPLSLPRSCPCGKTRKTAPCNEPIDTCEDTCYKLLSCGKHYCTQRCHKGDCSLCLIVTKKTCRCGMHEKELPCWKAFSCETKCKKIRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCSSVCHDGPCYPCKLQSQVKCRCGSTCITVPCGRERRARPNCMEPCRVPSKCHHQNKHKCHKGDCPSCSQVCGLKNDTTNCEHLCSARCHAAVKIPLKNNPNNIFEYKFDNYEIKQMPHPKCEKKVMVACIGGHEIAEWPCWNSKPTSCQRLCGRNLKCGNHKCSLVCHNVTDPDDKNEQESCGSCIEGCEVKRPPGCVHRCKKSCHPPPCDPCLAQIKANCHCGLTQVYYKCSEYYSTTMDIEERQEKLKSCGNRCIKNYPCGHRCSAECHSGPCPNPQSCRKKVKIYCECRRIKMEVTCEKSRSKDTFIPCDDVCQVIKAESEKIKREEAEKQRLAEEERNRIELEQFEKRFGKRKPRERKVIAQEVKTNNNQMKLLIGSAAAIVVAAVVIFYFYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223893;
90% Identity
iTF_01318704;
80% Identity
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