Cpag019619.1
Basic Information
- Insect
- Cheilosia pagana
- Gene Symbol
- nfxl1
- Assembly
- GCA_936435595.1
- Location
- CAKZFE010000114.1:1-3062[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 2.1e+04 -8.0 6.4 15 19 127 131 126 131 0.82 2 20 0.21 1.5e+03 -0.5 0.8 4 10 162 168 161 168 0.95 3 20 3.5e-08 0.00025 21.3 14.8 1 18 176 192 176 193 0.98 4 20 1.6 1.1e+04 -3.2 1.1 5 10 218 223 218 223 0.93 5 20 5.6e-08 0.0004 20.6 13.1 1 19 229 248 229 248 0.98 6 20 2 1.4e+04 -3.5 1.8 6 10 273 277 272 277 0.89 7 20 6e-09 4.3e-05 23.7 13.7 1 19 283 301 283 301 0.99 8 20 1.3 9.4e+03 -3.0 0.9 5 10 325 330 325 330 0.93 9 20 3.1e-08 0.00022 21.4 10.1 1 18 336 353 336 354 0.96 10 20 0.6 4.3e+03 -1.9 0.4 1 5 363 367 363 372 0.84 11 20 3.8e-07 0.0027 17.9 16.9 1 18 388 405 388 406 0.98 12 20 1e-07 0.00071 19.8 14.5 3 19 417 433 409 433 0.85 13 20 0.0055 39 4.6 11.1 8 18 477 487 469 488 0.86 14 20 0.075 5.3e+02 1.0 5.2 3 11 501 509 491 510 0.83 15 20 0.47 3.3e+03 -1.5 0.9 6 10 569 573 568 573 0.90 16 20 3.2e-06 0.023 15.0 5.6 1 12 579 590 579 590 0.97 17 20 1.1 7.9e+03 -2.7 1.4 15 19 603 607 602 607 0.88 18 20 1.4e-05 0.1 12.9 14.2 3 19 619 635 618 635 0.94 19 20 3 2.1e+04 -5.0 1.3 10 13 642 645 640 645 0.70 20 20 5.9e-06 0.042 14.1 11.7 4 17 688 704 685 706 0.83
Sequence Information
- Coding Sequence
- AACATTGAACTGGCAAAAAAAATTACGGAGAACTACGAATCTAGTTCTGACGAGGATCAAATTGACGGTGGCAGCATTTTAGAAAAGCTCTACAAGAACTACACCGGCGGAAATGATCAGCTTCAGAAGACAGCTGCGTTTCTGGAGAATGTCTTGCAATCTGGCTCAGCTATATGCCTTATATGCATTGGCTCAGTAAAGAGGGCCGATGCGGTTTGGTCTTGCAAATACTGTTATTGTGTGCTTCATCTGTTGTGTATAAAACGTTGGGCTAACGATAGTGTAGCCTTGTTGAAGGAAAAAGGAACAGAGGAACAGGGCTATTACAACAATTTGGGCGAATTCATTCCCAAGAAGGTAAAAGCGGTCAAATGGTGTTGTCCGCAATGTCGTCAAGACTATCAGCCCGACGAACGACCGACACAATATGAATGTTTTTGCGGCAAAGAAGTCAATCCGCCAAATCAAGAGTGGCTAGTACCGCATTCCTGCGGTGAGACTTGTGAAAAGCCATTGCAACCACAATGTGGACACAAATGCTTACTACTTTGTCATCCAGGTCCTTGTCCTCCTTGTGCTCAGAATATAGTAGTGAGTTGCAAATGTGGCAAGTCTCCGAAGAAAGCCTTGCGATGTTTTCAAAAAAGTTGGACTTGCGACAGAAAGTGCTTAGAGATTCTGCCATGTGGAAAGCACAAATGTGATCAGATTTGTCATGTACCGGGACAGTGTCCAGCTTGCAGTAAGACCAGTCGTCAGAAATGTGTTTGTGGAAGCGAGGAAGCAGTAAAGAGCTGCTCGCAACGTCTATGGCAATGCAAGAAGGTCTGCAACAAAAAGTATACTTGTGGCATTCATAGCTGTAAAAAAGTGTGTCATGTTGGTCAGTGTGGAGAGTGCCCTCTAGGTCTTCCAAGAACATGCCCTTGTGGTAAAACTAAAAAGATCGCACCCTGCAATGAGCCAATAGATACCTGCAATGACACTTGCCAAAATTTGCTCTCATGCGGACAGCACTATTGCAGCCAGCGTTGTCATAAGGGCGATTGCAGCTTGTGTCTGAttataacaaagaaaaaatgtcGTTGTGGCATGCACGAAAAGGAAATACCGTGTTGGAAGTCGTTTTGCTGCGAAACTAAATGCAAAAAGGTTCGAGACTGCGGAAAGCATGCTTGCAACAAAAAGTGCTGTGATGGTCAGTGTCCACCGTGTGACAAGGTGTGTGGAAAGCCGCTTTCGTGTAAAAAACACAAGTGTAACTCTGTATGCCACGATGGCCCATGTTATCCGTGCAAGATAAAATCACAAGTCAAATGTCGCTGCGGAAGTACAAGCGTTACGGTGCCCTGTGGGCGCGAGCGTAAAGCACGCATCGGTTGCATGGAACTGTGCAGAGTTCCCTCCAAATGTCATcatcaaaataaacataaatgccACAAGGGCGAGTGTCCTGCGTGCAATCAAAAATGTGGACTGCGAAATGACACAACCAATTGCCAACATATCTGTGAGGCTCGTTGTCATGCGGCTGTGAGAGTTGCCCTCAAACAATCCACTGCCACTAACATATTTGAGTACAAATTTGAGAATTATGAAGTGAAAAATCTACCACATCCAAAATGCGAGCAGAAAGTTATGGTGTCCTGTATTGGAGGGCATGAGATAGCGGAATGGCCATGTTGGAATTCAAAGCCTAATTCATGCCAAAGGTTGTGTGGACGCAACTTACAATGTGGCAACCATACGTGTTCGCTTGTTTGTCACAGTGTACCTGCTCTAGATGAAAACCAGCAACAGGAAGGCTGCAAGCCATGTTCCGACGGATGTCTGATCAAACGGCCACCAGGTTGTATACATCGCTGCAAACGACCATGTCACCCAGCACCATGCGATCCATGCTCAGTGACGACTAAGGCAATGTGTCACTGTGGTCTTTCGCAAGTTTATTACAAATGTTCCGAATACTTTTCCTCGGAGGGAACACCAAATGATATTCTCAAACGACAAGAGGAGCTAAAAAGCTGCGGAAATCGTTGCATCAAAAATtTCCCATGTGATCATCGTTGCTCCTCCATCTGCCACTCGGGACCATGTCCTAATCCGCAAAACTGCCGTAAAAAGGTGAAAATCTACTGCGAATGTAAACGCATCAAAATGGAAGTTTCCTGTGAGAAATCTCGTTCCGGTACTGCGTCCATACCATGCGACGACAACTGTATAGTCACCAAAGCTGCTTTGGAGCAAATCAAGCAACAAGAAGCTGAAAAACAACGACTCGCCGAAGAGGAACAGAACCGCATTGAATTGGAACAATTTGAGAAGAGATTCGGCAAACGAAAACCTCGCGAACGTCGCGTTATCGCACAAGAAGTCCAGACCGACAATAACAAAATGAAGATATTAATTGTCGCAGCAGTTGTACTAACCGCCGCTGTTGGCTTGGGGCTTTATTGTTACCAGTAA
- Protein Sequence
- NIELAKKITENYESSSDEDQIDGGSILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAVWSCKYCYCVLHLLCIKRWANDSVALLKEKGTEEQGYYNNLGEFIPKKVKAVKWCCPQCRQDYQPDERPTQYECFCGKEVNPPNQEWLVPHSCGETCEKPLQPQCGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPKKALRCFQKSWTCDRKCLEILPCGKHKCDQICHVPGQCPACSKTSRQKCVCGSEEAVKSCSQRLWQCKKVCNKKYTCGIHSCKKVCHVGQCGECPLGLPRTCPCGKTKKIAPCNEPIDTCNDTCQNLLSCGQHYCSQRCHKGDCSLCLIITKKKCRCGMHEKEIPCWKSFCCETKCKKVRDCGKHACNKKCCDGQCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKIKSQVKCRCGSTSVTVPCGRERKARIGCMELCRVPSKCHHQNKHKCHKGECPACNQKCGLRNDTTNCQHICEARCHAAVRVALKQSTATNIFEYKFENYEVKNLPHPKCEQKVMVSCIGGHEIAEWPCWNSKPNSCQRLCGRNLQCGNHTCSLVCHSVPALDENQQQEGCKPCSDGCLIKRPPGCIHRCKRPCHPAPCDPCSVTTKAMCHCGLSQVYYKCSEYFSSEGTPNDILKRQEELKSCGNRCIKNFPCDHRCSSICHSGPCPNPQNCRKKVKIYCECKRIKMEVSCEKSRSGTASIPCDDNCIVTKAALEQIKQQEAEKQRLAEEEQNRIELEQFEKRFGKRKPRERRVIAQEVQTDNNKMKILIVAAVVLTAAVGLGLYCYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00313122;
- 80% Identity
- iTF_00312265;