Bscu026131.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- nfxl1
- Assembly
- GCA_949775065.1
- Location
- OX459113.1:93359365-93362761[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 5.5e+04 -8.1 6.4 15 19 168 172 167 172 0.82 2 18 0.15 4.2e+03 -0.5 0.8 4 10 203 209 202 209 0.95 3 18 2.4e-08 0.00067 21.2 14.8 1 18 217 233 217 234 0.98 4 18 0.61 1.7e+04 -2.5 2.1 5 10 259 264 259 264 0.95 5 18 4e-07 0.011 17.3 12.9 1 19 270 289 270 289 0.92 6 18 0.72 2e+04 -2.7 0.6 6 10 314 318 313 318 0.92 7 18 1e-08 0.00029 22.4 13.4 1 19 324 342 324 342 0.98 8 18 1.1 3.1e+04 -3.3 0.8 5 10 366 371 366 372 0.86 9 18 4.9e-08 0.0014 20.2 9.6 1 18 377 394 377 395 0.96 10 18 0.28 7.9e+03 -1.4 0.5 1 5 404 408 404 413 0.72 11 18 4.2e-06 0.12 14.0 17.9 1 18 429 446 429 447 0.98 12 18 3.4e-08 0.00095 20.7 13.1 3 19 458 474 450 474 0.85 13 18 0.00056 15 7.2 12.8 8 18 518 528 511 529 0.85 14 18 0.061 1.7e+03 0.7 4.6 3 11 542 550 532 551 0.85 15 18 0.33 9.1e+03 -1.6 0.9 6 10 610 614 609 614 0.90 16 18 2.2e-06 0.062 14.9 5.6 1 12 620 631 620 631 0.97 17 18 4.7e-05 1.3 10.7 14.5 4 19 661 676 659 676 0.93 18 18 1.1e-05 0.3 12.7 7.0 1 18 727 746 727 747 0.89
Sequence Information
- Coding Sequence
- ATGTCGGCGTCAGGTTTATCGAAAGgtagaaaaccacaaaatcatGGTTCGAATGCATTACAAAAAAATGACAAATCCAAAAATAAACCGCAAACAAACAATTTCCAAGAGATACAATCTAAAAATATGGAATTGGCTAAGAAGATTACAGAGAACTATGAATCTAGTTCCGATGAGGAACAGCTTGATGGAGACAGGATCTTAGAGAAACTCTACAAGAACTACTCTGGCGGAGATGATCAGCTTCAAAAAACAGCGACATTCCTAGAAAACGTACTACAATCTGGCTCAGCAATTTGCTTGATATGCATTGGTTCTGTAAAGAGAGCGGATCCAGTTTGGTCTTGCAAATACTGCTATTGTGTGTTTCATCTGTTGTGCGTTAAACGATGGGCTAACGATAGTATAGCATTGTTGAAGGATAAAGGAACTGAAGAACAGGGTTATTACAATAATATGGGTGAATTCATTCCAAAGAAGGTTAAAACCGTGAAATGGTGTTGTCCACAGTGTCGTCGTGACTATCTACCCGACCAAAGGCCGACACAATATGAGTGTTTTTGCGGAAAAGAAATTAATCCGGTAAATCAGGAGTGGATTGTACCCCATTCGTGCGGTGAAACTTGTGAAAAACCACTGCAACCAGAATGTGGACACAAGTGTTTGCTGCTTTGTCATCCAGGTCCCTGTCCTCCATGTGCTCAGAATATAGTAGCCAGCTGTAAGTGTAGAAAATCACCACCTAAAACATTGCGATGCTTTCAGAAGAGTTGGACTTGCGAAagaaaatgctcaaaaatgctaCCGTGTGAGAAGCACAAATGTGATCAGGTTTGTCATCTGTCGGGACAATGTCCCCCCTGTAGTAAAACAAGTCTTCAAAAGTGTGTTTGCggaatggaacaagcaataaaGAGCTGTACACAGCGAGTGTGGCATTGCAAAAGAGTTTGCAACAAGAAATATAGTTGTAGTATTCATAGTTGTAAAAAGGTGTGTCATGACGGACCATGCGGAGAATGTCCTCTGAGCTTGCCAAGGACATGTCCCTGTGGTAAAACTAAAAAGGTTGCACCCTGCAACGAATCGATTGATACTTGTGACGACACTTGCCAAAAGTTACTCTCATGTGGGACACATTATTGCAGTCAAAGATGTCACAAAGGCGATTGCAGTTTGTGTTTGAttataacaaagaaaaaatgtcGCTGCGGTATGCACGAGAAAGAGGTACCCTGCTGGAAAACGTTTTTCTGTGAAACTAAATGTAAAAAGATCAGAGACTGTGGAAAGCATGCTTGTAATAAAAAGTGCTGTGGTGGGTCATGTCCACCATGTGACAAAGTGTGTGGAAAACTACTATCGTGCAAGAAACACAAGTGTACATCTGTGTGCCACGATGGTCCATGTTATCCGTGTAAGCTTAAATCAGACGTCAAATGCCGCTGCGGAAGCACATGCATTACAGTACCCTGTGGAAGAGAACGTAAAGCACGTCCCAATTGCTTGGAAACTTGCAGAGTTCCAACAAAATGTCATCATCAAAATAAGCATAAATGTCACAAAGGTGATTGTCCGCCGTGCAATCAAGTATGTGGATTAAGAAACGACGTTACGAATTGCACACATATCTGCGAAGCTCGATGTCATGCGGCAGTAAGAGTTCCCCTTAAGTATTCCCCCAACGGTAGCATATTTGACTATAAATTAGAAAATTATGAGATTAAATGTCTACCACATCCGAAATGTGAACAGAAAGTAATGGTGTCGTGTATTGGAGGTCACGAGATTGCCAAATGGCCATGTTGGAATTCGAAGCCAACTTCATGTCAACGATTATGTGGGCGCTTTTTAAAATGTGGCAATCACACATGTTCACTTGTCTGTCACAGTGTACCTGTTTTAACTGACAAAGATCAACAGGAGGGCTGCGCAGCCTGTACCGAAGGATGCCAGTTCAAACGTCCCCCGGGTTGTGTTCACAACTGTAAAAGACCTTGCCATCCGGCTCCATGTGATCCATGCTCGGcaacaataaaaacaatgtgTCACTGTGGTCTCTCTCAAGTTTATTTCAAATGTTCCGACTACTTCGTGACAGAGGGATCGTTAAGCGAGATCTTAGCCCGGAAAGAACGGCTAAGAAGTTGTGGAAATCGTTGTATTAAAAATTACTCATGTGGTCATCGTTGCTCAGCCATATGTCATTCTGCACTTTGCCCCAATTCACTGAGTTGTCGCAAAAAGGTTAAAATTTACTGCGAATGTAAGCGCATCAAAGCAGAAATATCATGCGAAAAATCCCGCGGTAATGCTGCGTCCATACCTTGCGACAATAATTGCCTAATCATTAGAGAAGCTATGGAGAAAATCCAGCAGCAAGAAGCAGAAAAACGAAGACTTATTGAAGATGAGCGAAATCGCATTGAATTGGAACAATTTGAAAAGCGATTTGGTAAACGCAAGCCCCGAGAACGTCGCCCTGTCGTACAAGAAGTCAAGAGCAACAAGAACAAAACGCAGTTAATAGTTGTCTCTGCAATGGTATCAATTGCAGCCGCTGCTTTAGCGTTTTATTGTTATCAGTAA
- Protein Sequence
- MSASGLSKGRKPQNHGSNALQKNDKSKNKPQTNNFQEIQSKNMELAKKITENYESSSDEEQLDGDRILEKLYKNYSGGDDQLQKTATFLENVLQSGSAICLICIGSVKRADPVWSCKYCYCVFHLLCVKRWANDSIALLKDKGTEEQGYYNNMGEFIPKKVKTVKWCCPQCRRDYLPDQRPTQYECFCGKEINPVNQEWIVPHSCGETCEKPLQPECGHKCLLLCHPGPCPPCAQNIVASCKCRKSPPKTLRCFQKSWTCERKCSKMLPCEKHKCDQVCHLSGQCPPCSKTSLQKCVCGMEQAIKSCTQRVWHCKRVCNKKYSCSIHSCKKVCHDGPCGECPLSLPRTCPCGKTKKVAPCNESIDTCDDTCQKLLSCGTHYCSQRCHKGDCSLCLIITKKKCRCGMHEKEVPCWKTFFCETKCKKIRDCGKHACNKKCCGGSCPPCDKVCGKLLSCKKHKCTSVCHDGPCYPCKLKSDVKCRCGSTCITVPCGRERKARPNCLETCRVPTKCHHQNKHKCHKGDCPPCNQVCGLRNDVTNCTHICEARCHAAVRVPLKYSPNGSIFDYKLENYEIKCLPHPKCEQKVMVSCIGGHEIAKWPCWNSKPTSCQRLCGRFLKCGNHTCSLVCHSVPVLTDKDQQEGCAACTEGCQFKRPPGCVHNCKRPCHPAPCDPCSATIKTMCHCGLSQVYFKCSDYFVTEGSLSEILARKERLRSCGNRCIKNYSCGHRCSAICHSALCPNSLSCRKKVKIYCECKRIKAEISCEKSRGNAASIPCDNNCLIIREAMEKIQQQEAEKRRLIEDERNRIELEQFEKRFGKRKPRERRPVVQEVKSNKNKTQLIVVSAMVSIAAAALAFYCYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- -
- 80% Identity
- -