Mqua053403.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- nfxl1
- Assembly
- GCA_949320155.1
- Location
- OX439484.1:157794127-157800076[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 8.1e+04 -8.1 6.4 15 19 167 171 166 171 0.82 2 19 0.15 6.1e+03 -0.5 0.8 4 10 202 208 201 208 0.95 3 19 2.4e-08 0.00098 21.2 14.8 1 18 216 232 216 233 0.98 4 19 0.6 2.4e+04 -2.5 2.1 5 10 258 263 258 263 0.95 5 19 1.2e-06 0.049 15.8 13.2 1 19 269 288 269 288 0.93 6 19 1.4 5.6e+04 -3.6 1.8 6 10 313 317 312 317 0.89 7 19 2.1e-09 8.6e-05 24.6 12.5 1 19 323 341 323 341 0.99 8 19 0.52 2.1e+04 -2.2 1.4 5 10 365 370 365 370 0.95 9 19 3.6e-08 0.0015 20.6 10.0 1 18 376 393 376 394 0.96 10 19 0.31 1.3e+04 -1.5 0.4 1 5 403 407 403 412 0.75 11 19 2.3e-05 0.92 11.7 15.3 1 18 428 445 428 446 0.98 12 19 2.7e-08 0.0011 21.1 13.0 3 19 457 473 449 473 0.85 13 19 0.00072 29 6.9 11.2 8 19 517 528 509 528 0.87 14 19 0.26 1.1e+04 -1.3 5.4 3 11 541 549 531 550 0.82 15 19 0.33 1.3e+04 -1.6 0.9 6 10 608 612 607 612 0.90 16 19 1.1e-05 0.43 12.7 6.0 1 12 618 629 618 629 0.97 17 19 3.8e-05 1.5 11.0 14.5 4 18 659 673 657 674 0.93 18 19 0.65 2.6e+04 -2.5 0.8 8 13 679 684 678 685 0.77 19 19 1.8e-06 0.072 15.2 13.3 1 17 725 743 725 745 0.86
Sequence Information
- Coding Sequence
- ATGGCTTCCAACATTTCCAAAGCAAACAAACCAAAGAGTATTCCTCCTAGcacaaccaacaaaaaatcagaaaatgcCAAGGCTCAACAAtcgaaaaaattcaaagaaattcaaaataaaaacatggaaATGGCCAAGAAAATTACAGAAAACTATGAGTCCAGCTCTGATGAAGAAGAACTCGATGGTGGAAAAATCTTGGAAAAGTTGTACAAAAACTACACAGGTGGAAATGATCAACTACAAAAAACTGCAGCTTTTCTAGAAAACGTACTTCAATCAGGGTCTGCAATATGTCTTATTTGTATTGGATCGGTTAAGAGAGCTGATGCGGTTTGGTCCTGCAAGTTTTGCTACTGTGTATTCCATTTGTTGTGTGTTAAGAGATGGGCAAACGATAGTATTGCCCTGCTCAAAGACAAAGGCACCGAAGAACAAGGATATTACACTAATTTGGGTGAATTCATTCCGAAAAAAGTTAAAGCTGTAAAGTGGTGTTGTCCACAATGTAGACGAGACTACCAACCCCAAGATAGGCCAACTCAATATGAATGCTTTTGTGGAAAAGAAGTTAACCCTGTTAATCAAGAATGGATAGTACCCCATTCTTGTGGTGAAACTTGTGAAAAACTATTGCAACCTGAATGCGGGCACAAATGTTTGCTTCTATGTCATCCTGgcCCATGTCCCCCCTGTGCTCAGACCATATTTGCAAGCTGCAAGTGTGGCAAATCTCCACCAAAAACACTTCGCTGCTTTCAAAAGACTTGGACATGCGAAAGAAAATGCTTAGAGGTTCTTCCTTGCGGCAAGCACAAATGTGATCAAGTTTGTCATTCGGCTAAACAATGTCCCCCTTGCAGTAAGTCCAGTCGTCAGAAATGTGTTTGCGGCCATGAGGAAGCAATGAAAAATTGTTCACAGAGAGTTTGGCAATGCAAGAAGGTCTGTAACAAAAAATATAGTTGCGGTATACACAGCTGCAAGCAAGTTTGCCATGACGGAGCATGCGGTGATTGTCCACTTAGCCTTCCTAGATCTTGTCCATGTGGAAAAACTAGAAAAACAGCACCTTGCAATGAAGCAATTGATACATGTGAAGACACTTGCTACAAATTACTCTCTTGTGGAAAACACTATTGTACTCAACGTTGTCATAAAGGCGATTGCAGCTTGtgCTTGATTGTCACAAAAAAGACATGTCGCTGTGGTATGCACGAAAAGGAGTTACCCTGTTGGAAGGCTTTTAGTTGTGAGACCAAATGCAAGAAGATTCGAGACTGTGGAAAGCATGCTTGCAACAAAAagtGCTGTGATGATCAATGTCCACCGTGTGATAAGGTTTGCGGAAAATTGTTGTCTTGTAAAAAACACAAGTGCAGTTCAGTTTGTCACGATGGTCCGTGTTATCCTTGTAAACTACAATCTCAAGTTAAATGTCGATGTGGAAGTACTTGTATTACAGTTCCATGCGGTAGAGAGCGAAGGGCTCGGCCCAATTGTATGGAATCTTGCAGaaTTCCTTCTAAATGTCATCaccaaaataaacataaatgtcACAAGGGAGATTGTCCAACATGCAGTCAAGTGTGCGGACTGAAAAATGAGACTACAAATTGCCAACATTTATGCATAGCTCGTTGTCATGCAGCTGTGAAGATTCCTTTAAAAAATAACCCGAGTAATATATTTGAATACAAGTTTGATAATTATGAAATCAAACAAATGCCTCATCCCAAATGTGAAAAGAAAGTAATGGTTGCCTGCATTGGTGGCCATGAGATTGCCGAATGGCCATGTTGGAATTCTAAGCCAACTTCATGTCAACGTCTTTGCGGGCGTAATTTGAAATGTGGCAATCATAACTGTTCGCTTGTTTGTCACAAAGTATCTAGTCCCGATGATCAAAATGAACAAGAAGGCTGTGGAGCGTGTAAAGACGGCTGCGAAATTAAACGACCACCAGGCTGTGTTCATCGTTGCAAAAAACCGTGCCATCCATCGCCTTGTGACCCATGCCTTGCACAAATTAAAGCAACTTGTCATTGTGGACTTACGCAGGTTTATTACAAATGTTCAGAATATTACTCAACTAAAGGTGATACCCAAGACATTGAGGAACGCCAAGAAAAATTGAAGAGTTGCGGAAATCGttgtattaaaaatTATTCATGTGGTCATCGCTGTTCAGCTGAATGTCATTCAGGACCTTGTCCAAATCCACAAAACTGCCGTAAAAAGGTCAAAGTCTACTGTGAATGCAAGCGCATTAAAACTGAAGTCTCTTGCGAAAAATCACGATCTCAGGAATCATTTATACCTTGTGATGATATATGTCTAGTAGTAAAAGCTGACATAGAGAGAATCAAAAACGAAGAAGCCGAGAGACTGAGGCTTGTTGAAGAGGAACGCAATCGCATCGAATTGGAACAATTTCAAAAGAGATTTGGCAAACGGAAACCAAGGGAACGTAAAATAATCGCACAAGAagtgaaaacaaataacaatCAAATGATATTGCTGGTTGGAGCTGCAGCAGCTATAGCTGTAGCTACAGcgttaactttttatttttatttataa
- Protein Sequence
- MASNISKANKPKSIPPSTTNKKSENAKAQQSKKFKEIQNKNMEMAKKITENYESSSDEEELDGGKILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAVWSCKFCYCVFHLLCVKRWANDSIALLKDKGTEEQGYYTNLGEFIPKKVKAVKWCCPQCRRDYQPQDRPTQYECFCGKEVNPVNQEWIVPHSCGETCEKLLQPECGHKCLLLCHPGPCPPCAQTIFASCKCGKSPPKTLRCFQKTWTCERKCLEVLPCGKHKCDQVCHSAKQCPPCSKSSRQKCVCGHEEAMKNCSQRVWQCKKVCNKKYSCGIHSCKQVCHDGACGDCPLSLPRSCPCGKTRKTAPCNEAIDTCEDTCYKLLSCGKHYCTQRCHKGDCSLCLIVTKKTCRCGMHEKELPCWKAFSCETKCKKIRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCSSVCHDGPCYPCKLQSQVKCRCGSTCITVPCGRERRARPNCMESCRIPSKCHHQNKHKCHKGDCPTCSQVCGLKNETTNCQHLCIARCHAAVKIPLKNNPSNIFEYKFDNYEIKQMPHPKCEKKVMVACIGGHEIAEWPCWNSKPTSCQRLCGRNLKCGNHNCSLVCHKVSSPDDQNEQEGCGACKDGCEIKRPPGCVHRCKKPCHPSPCDPCLAQIKATCHCGLTQVYYKCSEYYSTKGDTQDIEERQEKLKSCGNRCIKNYSCGHRCSAECHSGPCPNPQNCRKKVKVYCECKRIKTEVSCEKSRSQESFIPCDDICLVVKADIERIKNEEAERLRLVEEERNRIELEQFQKRFGKRKPRERKIIAQEVKTNNNQMILLVGAAAAIAVATALTFYFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00984705;
- 80% Identity
- -