Nint018386.1
Basic Information
- Insect
- Neoascia interrupta
- Gene Symbol
- nfxl1
- Assembly
- GCA_947623515.1
- Location
- OX392463.1:187604840-187609472[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.6e+04 -8.1 6.4 15 19 169 173 168 173 0.82 2 19 0.15 2.7e+03 -0.5 0.8 4 10 204 210 203 210 0.95 3 19 2.9e-08 0.00052 20.9 16.6 1 19 218 235 218 235 0.99 4 19 1.1 2e+04 -3.3 1.1 5 10 260 265 260 265 0.93 5 19 9.4e-08 0.0017 19.3 12.7 1 19 271 290 271 290 0.97 6 19 0.9 1.6e+04 -3.0 0.8 6 10 315 319 314 319 0.91 7 19 2.3e-09 4.1e-05 24.5 13.3 1 19 325 343 325 343 0.99 8 19 0.0082 1.5e+02 3.5 2.6 5 12 367 374 367 374 0.94 9 19 1.4e-07 0.0026 18.7 11.5 1 18 378 395 378 396 0.96 10 19 0.42 7.7e+03 -2.0 0.4 1 5 405 409 405 414 0.84 11 19 5.8e-07 0.01 16.8 15.7 1 18 430 447 430 448 0.98 12 19 1e-08 0.00019 22.4 13.2 3 19 459 475 451 475 0.85 13 19 0.00063 11 7.1 13.0 8 18 519 529 511 530 0.86 14 19 0.052 9.5e+02 0.9 4.8 3 11 543 551 533 552 0.83 15 19 0.33 6e+03 -1.6 0.9 6 10 611 615 610 615 0.90 16 19 4.5e-05 0.82 10.7 5.6 1 11 621 631 621 632 0.97 17 19 0.001 18 6.4 12.3 3 19 661 677 660 677 0.94 18 19 0.65 1.2e+04 -2.5 0.8 8 13 682 687 681 688 0.77 19 19 1.6e-07 0.0029 18.5 12.6 1 17 728 746 728 748 0.86
Sequence Information
- Coding Sequence
- ATGTCGTCTTCAAAGTTGTCCAAAGCCTCCAAACCAACAAAACATTCGAAGCCCTCTACCAAGCCAGAGAAGTCGGCGGATAAGTCTCATCCGCAAATAAACAAATTTTTAGAGATTCAAACAAAAAACATAGAAATGGCGAAAAAGATCACCGAGAACTATGAATCTAGCTCCGATGAGGAGCAGCTCGACGATACTAGCATTTTGGAAAAACTTTACAAGAACTATTCGGGCGGAAATGATCAACTTCAAAAGACAGCCGCCTTTTTGGAGAATGTTCTTCAATCTGGCGCAGCTATATGCCTCATCTGTATAGGCTCCGTGAAGAGAGCCGATGCGGTGTGGTCTTGCAAGTACTGCTATTGTGTCTTCCATTTGATGTGTGTAAAGCGATGGGCCAACGATAGTATAGCTCTACTGAAGGACAAGGGCACCGAAGAGCAGGGCTACTACAACAATTTGGGCGAGTACATTCCGAAGAAAGTAAAAACGGTCAAGTGGTGCTGTCCACAGTGTCGCCGTGACTACCAACCTGATGAGAAACCAACACAGTATGAGTGCTTTTGCGGCAAAGAGTTGAATCCAGTGAATGAAGAGTGGTTGGTGCCTCATTCGTGCGGTGAAACGTGCGGTAAACCTCTGCAACCCGAGTGCGGTCACAGATGTCTTCTTCTGTGTCATCCAGGTCCATGCCCACCGTGTCCTCAGAACATAGTAGTAAGCTGTAAGTGCGGCAAATCCCCACCCAAAACGATGCGATGCTTCCAAAAGAGTTGGACATGCGATAGAAAATGTACCGAAATCCTGTCGTGTGGAAAGCACAAGTGTGATCAGATCTGTCATGCGCAGGGACAGTGTCCTGCATGCAGCAAAACCAGCCTCCAGAAGTGTGTTTGCGGGAATGAGGAAGCAAAGAGAAGTTGCGCACAACGAATATGGCACTGCAAGAAGGTCTGTAACAAGAAGTACAGTTGTGGTATTCACAGCTGCAAGAGAGTGTGTCACGTTGGACCGTGCGGCGATTGTCCCCTCAGCCTTCCAAGAACTTGTCCTTGCGGGAAAACGAAAAAGACAGTTCCATGCAGTGAACCAGTTGAAACTTGTGAGGACACATGCCACAAGGTTCTTTCATGTGGGAAGCACTATTGCAGCCAACGATGCCACAAGGGAGAATGTAGTTTGTGCACAATAATCACGAAGAAAACATGCCGCTGCGGTATGCACGAGAAGGAAATTCCCTGCTGGAAACAGTTTAGCTGTGAAACAAAATGCAAAAAGATTCGAGACTGCGGAAAGCACGCTTGCAACAAAAAGTGTTGTGACGGTCAGTGTCCGTCATGCGATAAGGTTTGTGGAAAGTTGCTCTCGTGCAAAAAGCATAAATGCGAGTCCGTTTGCCACGATGGTCCGTGTTATCCGTGCAAACTGAAATCACAAGTGAAATGCCGCTGTGGAAGCACATGCATAACAGTTCCATGTGGAAGAGAGCGTAGAGCACGTCCGGTTTGCATGGAACTTTGCAGGATCCCTTCGAAGTGTCACCACCAGAACAAGCACAAATGTCACAAGGGTGATTGCCCACCATGCAATCAAAAATGCGGCTTAAGAAACGATGTCACAAATTGCAAGCACATATGTGAAGCGCGTTGCCATGCGGCTGTGCGAGTCCCCCTAAAGGCTACTAACAGTGGCAACATATTTGAGTACAAGGCTGATAACTTTGAAATTAAATGTCTTCCACATCCGAAATGCGAGAAAAAAGTTATGGTAGCGTGTATTGGGGGTCACGAGACAGCCGAGTGGCCATGCTGGAATTCAGCTCCAACATCTTGTCAACGGCTGTGTGGACGATCGTTGAATTGTGGCAACCATGCATGCTCCCTTGTCTGTCACGGTGTACCCGATATTGATGGAAAGCAGCAACAGGATGGCTGTGCACCATGTATAGAAGGATGTCAAATCGAACGTCCACCGGGTTGCATTCATCCCTGCAAACGTCGCTGCCATCCAGCTCCATGTGATGTCTGTTCTGTTACAATGAAAGCCACATGCCATTGTGGTTTAACTCAGGTGTACTATAAATGCGCCGAATACTACGCCTTAGAGCAAACGCCAGCCGAAATCTTGTCAAGGCAAGAAAAGCTCAAAAGTTGTGGAAATCGTTGCATAAAAAATTATCCGTGCGGTCATCGTTGTTCATCGATTTGCCACTCGGGACCGTGTCCAAATCCACAAAATTGTCGTAAGAAAGTAAAAGTCTACTGCGAGTGTAAGCGCATCAAAACAGAAGTCGCCTGCGAAAAATCGCGCTCTGGATCCGAGTTCATACCGTGCGATGAAAATTGCATGATTGCAAAGGCAGCTTTGGAAAAAATCAAGCAAAAGCAGGAGGAAAAGGAAAGACTCGCTGAAGAGGAACGCAACCGCATTGAATTGGAACAATTTGAGAAAAGATTCGGCAAGCGAAAGCCTCGCGAACGCCGAGTCGTTGCACAAGAAATTAAAACAAACAAAAATCGTACGCAGTTATTTGTTGCCGCTGCAATAGTGGTGACTGCAGCTGCGGCTTTTGGCTTTTATTGGTTTCAATAA
- Protein Sequence
- MSSSKLSKASKPTKHSKPSTKPEKSADKSHPQINKFLEIQTKNIEMAKKITENYESSSDEEQLDDTSILEKLYKNYSGGNDQLQKTAAFLENVLQSGAAICLICIGSVKRADAVWSCKYCYCVFHLMCVKRWANDSIALLKDKGTEEQGYYNNLGEYIPKKVKTVKWCCPQCRRDYQPDEKPTQYECFCGKELNPVNEEWLVPHSCGETCGKPLQPECGHRCLLLCHPGPCPPCPQNIVVSCKCGKSPPKTMRCFQKSWTCDRKCTEILSCGKHKCDQICHAQGQCPACSKTSLQKCVCGNEEAKRSCAQRIWHCKKVCNKKYSCGIHSCKRVCHVGPCGDCPLSLPRTCPCGKTKKTVPCSEPVETCEDTCHKVLSCGKHYCSQRCHKGECSLCTIITKKTCRCGMHEKEIPCWKQFSCETKCKKIRDCGKHACNKKCCDGQCPSCDKVCGKLLSCKKHKCESVCHDGPCYPCKLKSQVKCRCGSTCITVPCGRERRARPVCMELCRIPSKCHHQNKHKCHKGDCPPCNQKCGLRNDVTNCKHICEARCHAAVRVPLKATNSGNIFEYKADNFEIKCLPHPKCEKKVMVACIGGHETAEWPCWNSAPTSCQRLCGRSLNCGNHACSLVCHGVPDIDGKQQQDGCAPCIEGCQIERPPGCIHPCKRRCHPAPCDVCSVTMKATCHCGLTQVYYKCAEYYALEQTPAEILSRQEKLKSCGNRCIKNYPCGHRCSSICHSGPCPNPQNCRKKVKVYCECKRIKTEVACEKSRSGSEFIPCDENCMIAKAALEKIKQKQEEKERLAEEERNRIELEQFEKRFGKRKPRERRVVAQEIKTNKNRTQLFVAAAIVVTAAAAFGFYWFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- -
- 80% Identity
- -