Fcup017276.1
Basic Information
- Insect
- Ferdinandea cuprea
- Gene Symbol
- nfxl1
- Assembly
- GCA_963576555.1
- Location
- OY754960.1:39798928-39804137[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.3e+04 -8.1 6.4 15 19 164 168 163 168 0.82 2 20 0.15 2.5e+03 -0.5 0.8 4 10 199 205 198 205 0.95 3 20 2.4e-08 0.0004 21.2 14.8 1 18 213 229 213 230 0.98 4 20 1.1 1.8e+04 -3.3 1.1 5 10 255 260 255 260 0.93 5 20 1.5e-08 0.00024 21.9 12.1 1 19 266 285 266 285 0.97 6 20 1.4 2.3e+04 -3.6 1.8 6 10 310 314 309 314 0.89 7 20 3.2e-09 5.2e-05 24.0 14.1 1 19 320 338 320 338 0.99 8 20 0.92 1.5e+04 -3.0 0.9 5 10 362 367 362 367 0.93 9 20 3.6e-07 0.0059 17.4 12.6 1 18 373 390 373 391 0.96 10 20 0.31 5.1e+03 -1.5 0.4 1 5 400 404 400 409 0.75 11 20 3.4e-07 0.0056 17.5 15.2 1 18 425 442 425 443 0.98 12 20 7.1e-08 0.0012 19.7 14.5 3 19 454 470 446 470 0.85 13 20 0.02 3.3e+02 2.3 12.3 8 18 514 524 506 525 0.86 14 20 0.012 2e+02 3.0 5.6 1 11 537 546 537 547 0.95 15 20 0.33 5.4e+03 -1.6 0.9 6 10 606 610 605 610 0.90 16 20 2.2e-06 0.037 14.9 5.6 1 12 616 627 616 627 0.97 17 20 1.7 2.8e+04 -3.9 1.1 15 18 640 643 640 644 0.86 18 20 0.0011 18 6.3 14.7 1 18 655 671 655 672 0.94 19 20 2 3.3e+04 -5.1 2.0 9 13 678 682 677 682 0.74 20 20 5.5e-06 0.091 13.6 14.5 3 17 724 741 713 743 0.82
Sequence Information
- Coding Sequence
- atgtcGACAAATTTAACTAAGGGAGGCAAACAACAAAAGGATGCAAGCAAAAATTCgggaaaaccaaaaaataaacctcgtgtagaaaaatttacaaatattcaGACTAAAGACATTGaaattgcaaagaaattaaCGGAAAACTACGAATCAAGTTCGGATGAGGAACAACTCGACGGAGGCAAAATTCTAGaaAAGCTATACCAGAACTACACTGGCGGAAATGATCAGCTTCAGAAGACCGCAgcgtttttggaaaatgttttgcAGTCTGGTTCAGCAATTTGTCTTATTTGCATTGGGTCGGTAAAAAGAGCCGATTCAGTTTGGTCTTGTAAGTACTGCTACTGCGTCTTTCATTTGCTGTGTATAAAACGATGGGCGAACGATAGCATAGCTCTGCTAAAGGAAAAGGGAACCGAAGAGCAAGGATACTACACTAACTTGGGAGAATTTATACCAAAGAAGTGCAGAGCCGTCAAGTGGTGTTGTCCTCAGTGCCGGCGGGACTATCAACCCGAGGAGAGACCAACGCAGTACGAGTGCTTTTGTGGCAACGAAGTCAATCCCCCGAATCAAGAGTGGCTTGTACCACATTCCTGTGGCGAAACTTGTGGAAAACCATTGCAACCAGAATGCGGGCATAAGTGTTTGCTACTTTGTCATCCAGGCCCTTGCCCTCCTTGTGCCCAGAATATTGTAGTAAGCTGCAAATGTGGCAAATCACCACAAAAGGTTTTGCGATGCTTTCAGAAAAGTTGGACTTGCGATAGAAAATGTTCGGAGTTGCTACCGTGTGGGAAGCACAAATGTGATCAAATATGTCATGCTGCGGGTCAGTGTCCGTCTTGTAGCAAGACAAGTCGTCAGAGGTGCATTTGTGGCAACGAGGAGGCAGTAAAAAGCTGCTCACAACGTGTGTGGCAATGCAAAAAGGTCTGCAACAGAAAGTACGGATGCGGCATTCATAATTGCAAGAAAGTTTGCCATGAAGGTCGGTGTGGTGAATGCCCTCTGGGACTTCCAAGGACATGTCCTTGTGGTAAAACTaaaaagaTTGCACCTTGCAATGAACCGATTGAAACTTGCAACGACACATGCCAAAAATTGCTATCATGTGGGCAACACTATTGTAGCCACAAGTGTCACAAGGGCGATTGTagtttgTGTTTGATTATCACAAAGAAGAAATGTCGCTGCGGCATGCATGAAAAAGAGTTACCTTGTTGGAAGACGTTCTTTTGCGAAACCAAGTGTAAAAAGATACGCGACTGTGGAAAACACGCTTGCAACAAAAAGtGCTGCGATGGTCTGTGTCCCCCGTGCGACAAAGTGTGTGGAAAGCCACTGTCGTGCAAAAAGCACAAGTGCAACTCTGTCTGCCACGATGGTCCGTGTTACCCATGCAAGCTTAAATCGCAAATCAAATGCTGCTGCGGTACCACTTCTGTTACAGTGCCTTGCGGTAGAGAGCGCAGGGCACGTCCACTCTGCATGGAACTGTGCAGAATACCATCCAAATGTCATCATCAAAATAAGCACAAATGCCATAAGGGCGATTGCCCTGGGTGTAACCAAAAGTGTGGACTAAAGAACGACACCACTAATTGCGGACATATCTGTGAAGTTCGTTGCCACGCAGCTGTGCGGGTTCCGGTAAAACAATCCACTGCCACAAATATATTTGTGTATAAATTTGAGAACTATGAAGTGAAGAGTCTTCCACATCCCAAATGTGAGAAAAAAGTAATGGTTTCCTGCATTGGAGGACATGAGATTGCCGAATGGCCATGTTGGAATTCAAAGCCTACTTCATGTCAGCGGTTGTGTGGTCGTAATTTAAAATGCGGAAATCATACCTGTTCACTGGTTTGTCACAGTGTACCTGATCTGGATGCAAAGCATcAACAAGAAGGATGCGCACCATGCCTCGAAGGTTGCCAGATGGAGCGTCCCCAAGGCTGCTCTCATCGGTGCAAACGACAATGCCACCAACCTCCATGTGATCCATGTGCAGCAACAATCAAAACAACGTGTCACTGTGGTCTTTCGCAGGTTTACTACAAATGCTCTGAATATTATTCTCCAGAAGAAACGGCAAGCGAAGTCTTAGAACGACAAGAGAAGCTAAAAAGCTGTGGTAATCGCTGCGTTAAAAATTTTCCATGCAATCATCGCTGTTCATCAATTTGTCATTCGGGACCTTGTCCCAATCCTCAAAACTGTCGCAAAAAGGTGAAAATCTACTGCGAATGCAAACGCCTTAAAATTGAAGTCTCATGCGAGAAATCCCGATCTGGGACTGCGTCCATACCCTGCGATGATAATTGTCTGATCACAAAGGCAGCTTTGGAGAAAGCGAAGCAgcacgaagaagaaaaacaaagacTGGCTGAAGAGGAACGAAATCGCATCGAATTGGAACAATTCGAAAAAAGATTCGGCAAACGAAAACCCCGCGAACGTCGTGTCATCGCAAAAGAAGTCAAAACAGACAATAACCAAAGAAAGATAATAATTGCATCTGCAGTCGCACTTGCTGCTGCTGTGGGATTGACCATTTATTTTTACCAATAA
- Protein Sequence
- MSTNLTKGGKQQKDASKNSGKPKNKPRVEKFTNIQTKDIEIAKKLTENYESSSDEEQLDGGKILEKLYQNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADSVWSCKYCYCVFHLLCIKRWANDSIALLKEKGTEEQGYYTNLGEFIPKKCRAVKWCCPQCRRDYQPEERPTQYECFCGNEVNPPNQEWLVPHSCGETCGKPLQPECGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPQKVLRCFQKSWTCDRKCSELLPCGKHKCDQICHAAGQCPSCSKTSRQRCICGNEEAVKSCSQRVWQCKKVCNRKYGCGIHNCKKVCHEGRCGECPLGLPRTCPCGKTKKIAPCNEPIETCNDTCQKLLSCGQHYCSHKCHKGDCSLCLIITKKKCRCGMHEKELPCWKTFFCETKCKKIRDCGKHACNKKCCDGLCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKLKSQIKCCCGTTSVTVPCGRERRARPLCMELCRIPSKCHHQNKHKCHKGDCPGCNQKCGLKNDTTNCGHICEVRCHAAVRVPVKQSTATNIFVYKFENYEVKSLPHPKCEKKVMVSCIGGHEIAEWPCWNSKPTSCQRLCGRNLKCGNHTCSLVCHSVPDLDAKHQQEGCAPCLEGCQMERPQGCSHRCKRQCHQPPCDPCAATIKTTCHCGLSQVYYKCSEYYSPEETASEVLERQEKLKSCGNRCVKNFPCNHRCSSICHSGPCPNPQNCRKKVKIYCECKRLKIEVSCEKSRSGTASIPCDDNCLITKAALEKAKQHEEEKQRLAEEERNRIELEQFEKRFGKRKPRERRVIAKEVKTDNNQRKIIIASAVALAAAVGLTIYFYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- -
- 80% Identity
- -