Csor001758.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- nfxl1
- Assembly
- GCA_948107745.1
- Location
- OX443561.1:34199144-34202404[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 2.9e+04 -8.1 6.4 15 19 168 172 167 172 0.82 2 19 0.23 2.2e+03 -0.5 0.8 4 10 203 209 202 209 0.95 3 19 3.6e-08 0.00035 21.2 14.8 1 18 217 233 217 234 0.98 4 19 1.7 1.6e+04 -3.3 1.1 5 10 259 264 259 264 0.93 5 19 3.9e-08 0.00038 21.1 11.4 1 19 270 289 270 289 0.97 6 19 2.1 2e+04 -3.6 1.8 6 10 314 318 313 318 0.89 7 19 3.2e-09 3.1e-05 24.6 13.6 1 19 324 342 324 342 0.99 8 19 1.4 1.4e+04 -3.0 0.9 5 10 366 371 366 371 0.93 9 19 3.3e-08 0.00032 21.3 10.1 1 18 377 394 377 395 0.96 10 19 0.95 9.2e+03 -2.5 0.2 1 4 404 407 404 408 0.92 11 19 4e-07 0.0039 17.9 16.9 1 18 429 446 429 447 0.98 12 19 1.1e-07 0.001 19.7 14.5 3 19 458 474 450 474 0.85 13 19 0.03 2.9e+02 2.3 12.3 8 18 518 528 510 529 0.86 14 19 0.15 1.5e+03 0.0 5.1 3 11 542 550 532 551 0.85 15 19 0.49 4.8e+03 -1.6 0.9 6 10 610 614 609 614 0.90 16 19 3.4e-06 0.033 14.9 5.6 1 12 620 631 620 631 0.97 17 19 1 1e+04 -2.6 1.2 15 19 644 648 643 648 0.88 18 19 3.3e-05 0.32 11.7 13.3 4 19 661 676 659 676 0.93 19 19 2.4e-06 0.024 15.3 10.4 4 17 729 745 725 747 0.84
Sequence Information
- Coding Sequence
- atgtcatcatcaaatttaccaaaaggaaacaaacaatcaaaacaAGGAGCCAACGCATCACGAAATgctgaaaagccgaaaaatcaccttcaaccaaataaatttaaagaaattcaaataaaaaacattgaaatgGCGAAAAAAATTGCGGAGAACTACGAATCTAGTTCGGACGAGGAACAAATTGACGGTGGCAGCATTTTAGAAAAGCTTTACAAGAACTACTCTGGCGGAAACGACCAGCTTCAAAAAACAGCTGCGTTTCTGGAGAATGTCTTGCAATCTGGCTCAGCTATATGCCTTATATGCATTGGTTCGGTAAAGAGGGCCGATGCAGTTTGGTCTTGCAAATACTGTTACTGTGTCCTTCATCTGTTGTGCATAAAACGTTGGGCAAACGATAGTATAGCCCTGCTAAAGGAAAAAGGTACAGAGGAACAGGGCTATTACAACAATTTGGGTGAATTCATTCCAAAGAAGATCAAAGCAGTCAAATGGTGTTGTCCACAATGTCGTCAAGATTATCAGCCCGACGAACGACCTACACAGTATGAGTGTTTTTGCGGCAAAGAAGTCAATCCAGCAAATCAAGAGTGGCTGGTTCCACATTCCTGCGGTGAGACATGTGAAAAGCCATTGCAACCACAATGTGGACACAAATGCTTACTACTTTGTCATCCAGGTCCTTGCCCCCCGTGTGCTCAGAATATAGTAGTGAGTTGCAAATGCGGCAAGTCTCCAAAGAAAGCCTTGCGATGTTTTCAAAAGAGTTGGACTTGCGATAGAAAATGCTCAGAGATTCTGCCATGTGGGAAGCATAAATGTGATCAGATTTGTCATGTAGCGGGACAGTGTCCAGCTTGCAGTAAGACAAGTCGCCAGAAATGTGTTTGTGGAAGCGAGGAAGCAGTAAAGAGTTGCTCACAACGACTATGGCAATGCAAGAAGGTTTGCAACAAAAAGTACGCTTGTGGCATTCATAGCTGCAAGAAAGTATGTCATGATGGTGAGTGTGGAGAATGCCCACTAGGTCTTCCAAGAACATGCCCTTGTGGTAAAACTAGAAAGATTGCTCCTTGCAACGAATCGATAGATACTTGCAATGACACTTGCCAAAAGATGCTCTCATGCGGACAGCACTATTGCAGCCAGCGATGTCATAAGGGCGATTGTAGCTTGtgcTTGAttataacaaagaaaaaatgtcGTTGTGGTATGCACGATAAGGAAATACCCTGTTGGAAGTCATTTTGCTGCgaaactaaatgcaaaaaggTTCGAGACTGCGGAAAGCATGCTTGCAACAAAAAGTGCTGTGATGGTCAGTGTCCACCATGTGACAAAGTGTGTGGAAAGCCGCTGTCTTGTAAAAAGCACAAGTGTAACTCTGTATGCCACGATGGTCCATGTTATCCGTGTAAGATAAAATCACAAGTCAAATGCCGCTGCGGAAGTACGTGCGTCACAGTGCCCTGTGGGCGGGAGCGCAGAGCACGCATCGCTTGCATGGAACTGTGCAGAGTTCCCTCCAAGTGCCATCATCAAAATAAGCACAAATGCCACAAGGGCGATTGTCCTGGGTGCAATCAGAAGTGTGGACTAAAGAACGACACAACCAATTGTGAACATATCTGTGAGGCTCGTTGTCATGCGGCTGTGCGAGTTGCCCTCAAACAATCTACTGCCACAAATATTTTTGAGTACAAATTCGAGAATTATGAAATAAAAAGGCTACCACATCCAAGATGCGAACAAAAAGTTATGGTTTCCTGTATCGGAGGACATGAGATAGCCGAATGGCCTTGTTGGAATTCGAAGCCTAATTCATGCCAACGGTTGTGTGGCCGCAACTTACAATGTGGCAATCATACGTGTTCGCTGGTTTGTCATAGTGTACCTGATCTAGACGGAAAACAGcAACAGGAAGGCTGCAAGCCATGTCGCGAAGGATGTCAGATTGAACGTCCGCCAGGTTGTGTTCATCGCTGCAAGCGACCATGTCACAGAGCTCCATGTGATCCGTGCTCAGCGACAACTAAGACAATGTGCCACTGTGGCCTTTCGCaagtttattacaaatgttccgAGTACTTTTCTTCGACCGGAACGCCAGGTGAGATTCTCGAACGGCAAGAGAAGCTAAAAAGCTGCGGAAATCGTTGCATCAAAAATTACCCATGTGATCATCGTTGTTCCTCCATTTGCCATTCGGGACCATGTCCAAATCCGCAAAACTGTCGTAAAAAGGTGAAAATCTACTGCGAATGCAAGCGCATCAAAATGGAAGTCTCCTGCGAGAAAGCTCGTTCTGGCGCTGCGTCGATTCCATGCGACGACAACTGTCTACTGACCAAAGCTGCTTCAGAGAAAATCAAACAACAAGAAGCTGAAAAACAACGACTCGTCGAAGAGGAACAAAATCGCATTGAGCTGGAACAATTCGAGAAGAGATTTGGTAAACGAAAGCCTCGCGAACGTCGCGTTGTCGCACAAGAAGTCCAGACCAACAATAACCAAATAAAGATATTAATTGCCGCAGCAGTCGCACTAACAGCAGCTGTTGGCTTGGCGTTTTATTGTTACCAGTAA
- Protein Sequence
- MSSSNLPKGNKQSKQGANASRNAEKPKNHLQPNKFKEIQIKNIEMAKKIAENYESSSDEEQIDGGSILEKLYKNYSGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAVWSCKYCYCVLHLLCIKRWANDSIALLKEKGTEEQGYYNNLGEFIPKKIKAVKWCCPQCRQDYQPDERPTQYECFCGKEVNPANQEWLVPHSCGETCEKPLQPQCGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPKKALRCFQKSWTCDRKCSEILPCGKHKCDQICHVAGQCPACSKTSRQKCVCGSEEAVKSCSQRLWQCKKVCNKKYACGIHSCKKVCHDGECGECPLGLPRTCPCGKTRKIAPCNESIDTCNDTCQKMLSCGQHYCSQRCHKGDCSLCLIITKKKCRCGMHDKEIPCWKSFCCETKCKKVRDCGKHACNKKCCDGQCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKIKSQVKCRCGSTCVTVPCGRERRARIACMELCRVPSKCHHQNKHKCHKGDCPGCNQKCGLKNDTTNCEHICEARCHAAVRVALKQSTATNIFEYKFENYEIKRLPHPRCEQKVMVSCIGGHEIAEWPCWNSKPNSCQRLCGRNLQCGNHTCSLVCHSVPDLDGKQQQEGCKPCREGCQIERPPGCVHRCKRPCHRAPCDPCSATTKTMCHCGLSQVYYKCSEYFSSTGTPGEILERQEKLKSCGNRCIKNYPCDHRCSSICHSGPCPNPQNCRKKVKIYCECKRIKMEVSCEKARSGAASIPCDDNCLLTKAASEKIKQQEAEKQRLVEEEQNRIELEQFEKRFGKRKPRERRVVAQEVQTNNNQIKILIAAAVALTAAVGLAFYCYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00313122;
- 80% Identity
- -