Cver012756.1
Basic Information
- Insect
- Cheilosia vernalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_949126925.1
- Location
- OX421359.1:35084071-35087309[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.2e+04 -8.1 6.4 15 19 168 172 167 172 0.82 2 19 0.15 2.4e+03 -0.5 0.8 4 10 203 209 202 209 0.95 3 19 2.4e-08 0.00039 21.2 14.8 1 18 217 233 217 234 0.98 4 19 1.1 1.8e+04 -3.3 1.1 5 10 259 264 259 264 0.93 5 19 4.2e-08 0.00067 20.4 13.2 1 19 270 289 270 289 0.98 6 19 2 3.2e+04 -4.2 1.4 6 10 314 318 313 318 0.88 7 19 4.2e-09 6.8e-05 23.6 13.7 1 19 324 342 324 342 0.99 8 19 1.1 1.8e+04 -3.3 0.8 5 10 366 371 366 372 0.86 9 19 4e-08 0.00064 20.5 11.5 1 18 377 394 377 395 0.96 10 19 0.46 7.3e+03 -2.1 0.3 1 4 404 407 404 413 0.77 11 19 2.7e-07 0.0043 17.9 16.9 1 18 429 446 429 447 0.98 12 19 7.1e-08 0.0011 19.7 14.5 3 19 458 474 450 474 0.85 13 19 0.0017 28 5.7 10.7 8 18 518 528 510 529 0.86 14 19 0.21 3.4e+03 -1.0 5.8 3 11 542 550 541 551 0.87 15 19 0.33 5.3e+03 -1.6 0.9 6 10 610 614 609 614 0.90 16 19 2.2e-06 0.036 14.9 5.6 1 12 620 631 620 631 0.97 17 19 1.8 2.8e+04 -3.9 2.3 15 19 644 648 644 648 0.89 18 19 1e-05 0.16 12.8 14.2 3 19 660 676 659 676 0.94 19 19 1.6e-06 0.026 15.3 10.4 4 17 729 745 725 747 0.84
Sequence Information
- Coding Sequence
- atgtcagcatcaaatttaccaaaaaaaagcaaacaaacaaaacaagctGCCACCGCATCAAAAAATGCAGAAAAGCCAAAGAATAAGccgcaaacaaacaaatttaaagatATTCAAACCAAAAACATTGAAATAGCGAGAAAAATTGCGGAAAACTACGAATCTAGTTCTGACGAAGAACAAATTGATGGGGGGAGCATTTTAGAAAAGCTTTACAAGAACTACTCGGGCGGTAATGATCAGCTTCAGAAGACAGCTGCGTTTCTTGAGAATGTCTTGCAATCTGGCTCAGCTATATGCCTTATATGCATTGGTTCAGTAAAGAGGGCCGATTCAGTTTGGTCTTGCAAATACTGTTACTGTGTCCTTCATCTGTTGTGTATAAAACGTTGGGCAAATGATAGTGTAGCCTTGCTGAAGGAAAAAGGAACAGACGAGCAGGGCTATTACAACAATTTGGGTGAATTCATTCCCAAGAAGGTAAAAGCAGTCAAATGGTGTTGCCCACAATGTCGTCAAGACTATCAGCCCGATGAACGACCGACACAATATGAATGCTTTTGCGGCAAAGAAGTGAATCCGCCAAGTCAAGAGTGGCTTGTTCCACATTCCTGCGGTGAGACTTGTGAAAAACCATTGCAACCACAATGTGGACACAAATGCCTACTACTTTGTCACCCAGGTCCTTGCCCTCCTTGTGCTCAGAATATAGTTGTGAGCTGCAAATGTGGCAAGTCTCCAAAGAAAGCCTTGCGATGTTTTCAAAAGAGTTGGACTTGCGACAGAAAGTGCTCAGAGGTTCTGCCATGTGGGAAGCACAAATGTGACCAGATTTGTCATGCACCAGGGCAGTGTCCAGCTTGCAGTAAGACAAGTCGTCAGAAATGTGTTTGCGGAAGTGAGGAAGCAGTAAGGAGCTGCTCGCAGCGTGTCTGGCAATGCAAGAAGATCTGCAACAAAAAGTATAATTGTGGCATTCATAGCTGTAAAAAAGTATGCCATGTTGGGCAGTGTGGAGAATGTCCCCTAGGTCTTCCAAGAACATGCCCTTGTGGTAAGACTAAAAAGATAGCACCCTGCAACGAACCAATCGATACGTGCGATGACACTTGCCAAAAGCTGCTCTCATGCGGACAGCACTCTTGCAGCCAGCGTTGTCACAAGGGCGACTGCAGCTTGTGCCTGattataacaaagaaaaaatgtcGTTGTGGCATGCACGATAAGGAATTACCCTGTTGGAAGTCGTTTTGCTGTGAAACTAAATGCAAAAAGGTTCGAGACTGCGGAAAGCATGCTTGCAACAAAAAGTGCTGTGATGGTCAGTGTCCGCCATGTGACAAGGTGTGTGGAAAGCCGCTCTCTTGTAAAAAACACAAGTGTAACTCTGTATGCCACGATGGCCCATGTTATCCGTGCAAGATAAAATCGCAAGTCAAATGTTGCTGCGGAAGTACAAGCGTTACAGTACCCTGTGGACGCGAACGTAGAGCACGCATCGGTTGCATGGAATTGTGCAGAGTTCCATCCAAATGTCATCATCAAAATAAGCATAAATGCCACAAGGGCGATTGTCCTGCGTGCAATCAAAAATGTGCACTGAAAAATGACACAACCAATTGTGAACATATCTGTGAGGCTCGGTGTCATGCGGCTGTAAGAGTTGCCCTCAAACAATCAACTGCCAGTAACATATTCGAGTACAAATTTGAGAATtatgaaataaaaaatctgcCACATCCCAAATGCGAGCAGAAAGTCATGGTTTCCTGTATTGGAGGACATGAGATAGCGGAATGGCCATGTTGGAATTCGAAGCCCAATTCATGCCAAAGATTGTGTGGACGCAAGTTACGCTGTGGCAACCATACGTGTTCGCTTGTTTGTCACAGTGTACCCGACAAAGATAAAAACCAGCAACAGGAAGGCTGCAAGCCATGTTCCGAAGGATGTCAAATCGAACGCCCACCAGGATGTATACATCGCTGCAAACGACCATGTCACCCAGCTCCATGCGATCCATGTTCAGCCACAACTAAGACAATGTGTCACTGTGGACTTTCGCAAGTTTATTACAAATGTTCCGAGTACTTTTGCTCGGACGGAACACCCGATGAGATTCTCAAACGACAAGAGGAGTTAAAAAGCTGCGGAAATCGTTGCATTAAAAATTACCCATGTGACCATCGCTGTTCCTCCATCTGCCACTCGGGACCATGTCCTAATCCGCAAAACTGTCGTAAAAAAGTGAAAGTCTACTGCGAATGTAAACGCATCAAAATAGAAATTTCCTGCGAGAAATCTCGCTCCGGCAACGGGTTCGTACCATGCGACGACAACTGTATAGTCACCAAGGCTGCTTTGGAGCAAATCAAGCAACAAGAAGCTGAAAAACAACGACGCGCCGAAGAGGAGCAGAATCGCATTGAATTGGAACAATTTGAGAAGAGATTCGGCAAACGAAAGCCTCGCGAACGTCGAGTTGTCGCACAAGAAGTCCAGACAAAcaataatcaaataaaaatattaattgccACAGCAGTTGTACTAACAGCAGCTGTGGGCTTGGGGCTTTATTGTTACCATTAA
- Protein Sequence
- MSASNLPKKSKQTKQAATASKNAEKPKNKPQTNKFKDIQTKNIEIARKIAENYESSSDEEQIDGGSILEKLYKNYSGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADSVWSCKYCYCVLHLLCIKRWANDSVALLKEKGTDEQGYYNNLGEFIPKKVKAVKWCCPQCRQDYQPDERPTQYECFCGKEVNPPSQEWLVPHSCGETCEKPLQPQCGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPKKALRCFQKSWTCDRKCSEVLPCGKHKCDQICHAPGQCPACSKTSRQKCVCGSEEAVRSCSQRVWQCKKICNKKYNCGIHSCKKVCHVGQCGECPLGLPRTCPCGKTKKIAPCNEPIDTCDDTCQKLLSCGQHSCSQRCHKGDCSLCLIITKKKCRCGMHDKELPCWKSFCCETKCKKVRDCGKHACNKKCCDGQCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKIKSQVKCCCGSTSVTVPCGRERRARIGCMELCRVPSKCHHQNKHKCHKGDCPACNQKCALKNDTTNCEHICEARCHAAVRVALKQSTASNIFEYKFENYEIKNLPHPKCEQKVMVSCIGGHEIAEWPCWNSKPNSCQRLCGRKLRCGNHTCSLVCHSVPDKDKNQQQEGCKPCSEGCQIERPPGCIHRCKRPCHPAPCDPCSATTKTMCHCGLSQVYYKCSEYFCSDGTPDEILKRQEELKSCGNRCIKNYPCDHRCSSICHSGPCPNPQNCRKKVKVYCECKRIKIEISCEKSRSGNGFVPCDDNCIVTKAALEQIKQQEAEKQRRAEEEQNRIELEQFEKRFGKRKPRERRVVAQEVQTNNNQIKILIATAVVLTAAVGLGLYCYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00313122;
- 80% Identity
- -