Stae002873.1
Basic Information
- Insect
- Sphaerophoria taeniata
- Gene Symbol
- nfxl1
- Assembly
- GCA_943591125.1
- Location
- CALSBT010000019.1:8625835-8628888[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 4.2e+04 -8.1 6.4 15 19 169 173 168 173 0.82 2 20 1.9 2.7e+04 -3.5 0.9 4 10 204 210 204 210 0.84 3 20 3.4e-08 0.00048 21.3 14.3 1 18 218 234 218 235 0.98 4 20 3 4.2e+04 -4.4 1.7 5 10 260 265 260 265 0.91 5 20 4.8e-06 0.067 14.4 13.7 1 19 271 290 271 290 0.94 6 20 1.3 1.9e+04 -3.0 0.8 6 10 315 319 314 319 0.91 7 20 6.7e-09 9.4e-05 23.5 12.9 1 19 325 343 325 343 0.99 8 20 0.78 1.1e+04 -2.2 1.4 5 10 367 372 367 372 0.95 9 20 5.4e-08 0.00077 20.6 10.0 1 18 378 395 378 396 0.96 10 20 0.47 6.6e+03 -1.5 0.4 1 5 405 409 405 414 0.75 11 20 3.4e-05 0.48 11.7 15.3 1 18 430 447 430 448 0.98 12 20 5.2e-08 0.00073 20.7 13.1 3 19 459 475 451 475 0.85 13 20 0.74 1.1e+04 -2.2 0.6 5 10 502 507 502 507 0.95 14 20 0.0028 39 5.6 11.5 8 18 519 529 511 530 0.88 15 20 0.057 8e+02 1.4 5.1 3 11 543 551 533 552 0.85 16 20 0.0043 60 5.0 10.9 1 11 620 630 620 631 0.96 17 20 3 4.2e+04 -5.7 2.7 15 18 644 647 644 647 0.94 18 20 6.8e-05 0.96 10.7 12.8 4 18 661 675 659 676 0.93 19 20 3 4.2e+04 -5.5 1.7 10 13 683 686 681 686 0.69 20 20 4.4e-06 0.062 14.5 11.7 1 17 727 745 727 747 0.86
Sequence Information
- Coding Sequence
- ATGGCTTCAAACACATCCAAAGTTACCAAACCAAAACACACTACACATTCAAGCACAACTAATAAGAAACCCGAAACCTCAACCAAAGCCCAACAACCAAAGAAATTCAAGGAAATCCAAAACAAAAACATGGAAATCGCAAAGAAAATCACAGAAAACTACGAGTCCAGTTCGGATGAAGATGAACTCGATGGTGGCAAAATCCTGGAGAAATTGTACAAAAACTACTCGGGTGGAAATGACCAGCTGAAGAAAACAGCTGCTTGTTTGGAGAACGTCTTGCAGTCTGGTTCGGCAATATGTCTCATTTGCATCGGGTCAATTAAGAGAGCCGATGCTGTGTGGTCCTGCAAGTTTTGTTACTGCATTTTCCATTTGAATTGTGTCAAGCGATGGGCGAACGATAGCATTGCTCTGCTCAAAGACAAGGGAACCGAGGAGCAGGGCTATTACAATAACTTGGGTGAATTCATTCCGAAAAAAGTCAAGGCTGTTAAGTGGTGTTGTCCACAGTGTAGATGCGACTACCAGCCGCAGGATAGACCGACTCAGTATGAGTGCTTCTGTGGGAAGGAAGTAAATCCGATCTGTCAGGATTGGATAGTGCCGCATTCGTGTGGCGAAAATTGTGAGAAGCCTCTGCAACCCGAGTGTGGGCATCGATGTTTGCTGCTTTGTCATCCAGGTCCATGTCCACCCTGTGCTCAGACAATAACAACGAGCTGCAAATGTGGCAATTCACCGCCTATATCCGTCCGTTGCTTCCAAAAGACCTGGACTTGCAAGAGACGATGCTCAGAAGTGCTTCCTTGTGGAAAACACAAATGCGATCAAATTTGTCATTCCACTAAGCAATGTCCGCCTTGTAGCAAGTCTAGTTTGCAGAAGTGTGTTTGTGGCAGTGAGGAAGCCATGAAAAACTGCTCCCAGAGAATTTGGCATTGCAAGAAGGTCTGTAACAAAAAGTTTAGTTGCGGCATACACAGCTGCCGGCGAGTCTGCCATGACGGAGAATGTGGCGAGTGTCCCCTAAGCTTGCCCAGGTCCTGTCCTTGTGGGAAAACTAGAAAAATAGCTCCATGCAACGAACCGACTGAAACTTGCGAGGATACCTGCCTCAAGTTGCTATCGTGTGGGAAACACTACTGTACCCAACGCTGCCACAAGGGCGATTGCAGCTTATGCCTTATTGTCACCAAGAAGACTTGTCGTTGCGGCATGCACGAAAAGGAGCTGCCCTGCTGGAAGGCCTTCAGTTGCGAGACGAAATGCAAGAAGATTCGGGATTGTGGAAAGCATGCTTGTAACAAAAAGTGCTGCGATGATCAATGTCCTCCATGCGACAAGGTTTGTGGCAAATTGCTCTCCTGCAAGAAACATAAATGTACTTCGGTTTGCCACGATGGTCCATGCTACCCTTGCAAACTACAATCTCAGGTAAAATGCCGCTGTGGCAGCACAATTGTGACAGTTCCTTGCGGCAGGGAACGTCGAGCTCGGCCCACTTGTATGGAACTCTGTAAGATTCCATCAAAGTGTCATCACCAAAACAAGCACAAATGTCACAAGGGCGACTGTCCTTCGTGCATCCAAGTCTGCGGCTTGAAGAACGACACCACCAATTGCGAACATTCATGTTCCGCTCGGTGCCATGCTGCGGTGAAAGTTCCTTTGAAGAATACCTCGAATAACATTTTCGAATACAAGTTTGACAATTACGAAATCAAACAAATGCCACATCCGAGATGTGAAAAGCTAGTGCTGGTTGAGTGCATTGGCGGTCATGAGATTGCCGAATGGCCTTGCTGGAACTCGAAGCCGACATCGTGTCATCGTGCTTGTGGAAGAAAACTAAAGTGTGGCAATCACAAATGCTGTCTACCTTGCCACAATGTTCCTAACAGTGATGACAACAACGAACAAGAAGGCTGTAAACCGTGCGTCGAAGGGTGCGAAATCAAACGGCCATCAGGCTGTGTTCATCGGTGTAAAAAGTCGTGTCATCCGGCACCTTGTGATCCGTGCTTGGCACAAATCAAAGCAAGTTGCCATTGTGGACTGGGTCAGGTCTATTACAAGTGCTCCGAGTTCTATGCAATTGATGGTTCCGATCAGGACATCGAGGAACGCCAAGAGAAACTAAAAAGCTGCGGAAATCGTTGCATTAAAAACTATCCTTGCGGCCATCGTTGTTCAGCTGAATGCCACTCAGGAGCCTGTCCAAATCCAGAAAATTGCCGCAAAAAAGTCAAAATCTACTGTGAATGCAAACGCATCAAAGTTGATGTTTCGTGCGAGAAAGCTCGCTCCAAAGACGCATTCGTACAATGCGACGACATCTGTCAAGTCTTCAAAGCCGAGACCGAACGAATCAAGCAGGAAGAAGCCGAAAAGCAAAGACTCGTCGAAGAGGAGCGCAATCGCATCGAACTGGAACAATTTGAGAAGCGATTTGGCAAACGAAAGCCACGCGAACGCAAAGTCGTCGCACAACAAATCAAAACAAGCAACAATCAATTGAAAGTGCTAATTGGTTCTGCAGTAGCCATAGTCATAGCCGCAGGAATAACATTTTATTTATATTCGTCTTGA
- Protein Sequence
- MASNTSKVTKPKHTTHSSTTNKKPETSTKAQQPKKFKEIQNKNMEIAKKITENYESSSDEDELDGGKILEKLYKNYSGGNDQLKKTAACLENVLQSGSAICLICIGSIKRADAVWSCKFCYCIFHLNCVKRWANDSIALLKDKGTEEQGYYNNLGEFIPKKVKAVKWCCPQCRCDYQPQDRPTQYECFCGKEVNPICQDWIVPHSCGENCEKPLQPECGHRCLLLCHPGPCPPCAQTITTSCKCGNSPPISVRCFQKTWTCKRRCSEVLPCGKHKCDQICHSTKQCPPCSKSSLQKCVCGSEEAMKNCSQRIWHCKKVCNKKFSCGIHSCRRVCHDGECGECPLSLPRSCPCGKTRKIAPCNEPTETCEDTCLKLLSCGKHYCTQRCHKGDCSLCLIVTKKTCRCGMHEKELPCWKAFSCETKCKKIRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCTSVCHDGPCYPCKLQSQVKCRCGSTIVTVPCGRERRARPTCMELCKIPSKCHHQNKHKCHKGDCPSCIQVCGLKNDTTNCEHSCSARCHAAVKVPLKNTSNNIFEYKFDNYEIKQMPHPRCEKLVLVECIGGHEIAEWPCWNSKPTSCHRACGRKLKCGNHKCCLPCHNVPNSDDNNEQEGCKPCVEGCEIKRPSGCVHRCKKSCHPAPCDPCLAQIKASCHCGLGQVYYKCSEFYAIDGSDQDIEERQEKLKSCGNRCIKNYPCGHRCSAECHSGACPNPENCRKKVKIYCECKRIKVDVSCEKARSKDAFVQCDDICQVFKAETERIKQEEAEKQRLVEEERNRIELEQFEKRFGKRKPRERKVVAQQIKTSNNQLKVLIGSAVAIVIAAGITFYLYSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- -
- 80% Identity
- -