Pmac065372.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- nfxl1
- Assembly
- GCA_949715645.1
- Location
- OX454527.1:50666759-50678553[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 1.1e+05 -8.1 6.4 15 19 168 172 167 172 0.82 2 18 0.23 8.3e+03 -0.5 0.8 4 10 203 209 202 209 0.95 3 18 3.7e-08 0.0013 21.2 14.8 1 18 217 233 217 234 0.98 4 18 1.7 6.1e+04 -3.3 1.1 5 10 260 265 260 265 0.93 5 18 1.1e-05 0.42 13.2 10.6 1 19 271 290 271 290 0.96 6 18 2.1 7.6e+04 -3.6 1.8 6 10 315 319 314 319 0.89 7 18 3.1e-09 0.00011 24.6 14.2 1 19 325 343 325 343 0.99 8 18 1.4 5.1e+04 -3.1 0.9 5 10 367 372 367 372 0.93 9 18 1.3e-07 0.0049 19.4 12.6 1 18 378 395 378 396 0.96 10 18 4e-07 0.015 17.8 16.9 1 18 430 447 430 448 0.98 11 18 1.1e-07 0.0039 19.7 14.5 3 19 459 475 451 475 0.85 12 18 0.0026 96 5.7 10.7 8 18 519 529 511 530 0.86 13 18 0.15 5.6e+03 0.0 5.1 3 11 543 551 533 552 0.85 14 18 0.5 1.8e+04 -1.6 0.9 6 10 611 615 610 615 0.90 15 18 5.8e-06 0.21 14.1 5.7 1 12 621 632 621 632 0.97 16 18 3 1.1e+05 -5.3 1.8 15 19 645 649 645 649 0.86 17 18 0.00018 6.6 9.4 13.7 4 18 662 676 660 677 0.94 18 18 2.1e-06 0.076 15.6 10.2 4 17 730 746 726 748 0.84
Sequence Information
- Coding Sequence
- ATGTCGACAGCAAATTTTGCAAAAGGAAACAAACCAACAAAGCATGGCCCTAGTGCTTCTAGAAATTCGGAAAAATCAAAGAATAAACCTCAAACAAACCAATTTAAAGACATTCAAACTAAAAACATCGAAATGGCAAAGAAAATTACGGAAAACTACGAATCCAGTTCGGATGAGGAACAACTCGATGGAGGCAAAATTCTAGCAAAACTCTATCAGAATTACTGTGGCGGAAATGACCAGCTTCAGAAGACCGCCGCAATTTTGGAGAATGTTTTGCAATCTGGCGCAGCAATTTGTCTTATTTGCATTGGTTCAGTAAAAAGAGCTGATGCAGTTTGGTCTTGCAAGCACTGCTATTGTGTTTTTCATCTGTTGTGCGTCAAGAGATGGGCTAACGATAGCATAGCGCTGCTGAAGGAGAAGGGAACGGAAGAACAGGGCTATTACAATAATTTGGGTGAATTTGTACCAAAAAAGCTCAAAACCATCAAGTGGTGTTGTCCACAGTGTCGTTGTGATTACCAACCCGAGGATAGGCCTAAGCAATATGAGTGCTTTTGTGGGAATGAAGTCAACCCGCCAAATCAAGAGTGGCTTGTACCACATTCATGCGGCGAAACTTGTGGAAAGTTATTGCAACCAGAATGTGGACATAAGTGCTTGCTGCTCTGTCATCCAGGTCCGTGCCCTCCGTGTGCTCAGAATATTGTAGTGAGCTGCAAATGTGGAAAGTCTCCACAGAAGAAGGTTTTGCGATGTTTTCAGAAGAGTTGGACTTGCGACAGAAAATGTTCAGAGTTGCTTCCATGTGGTAAACATAAATGCGATCAGTTCTGTCACGCACCAGATCAGTGTCCAGCTTGTAGCAAGACAAGTCGCCAGAAGTGTGTTTGTGGCAGCGAGGAGGCCGTAAAAAGTTGCTCGCAACGGGTTTGGCAGTGTAAAAAGGTCTGCAACAAAAAGTACAGCTGCGGAATTCATAATTGCAAAAAAGTTTGTCATGATGGTCAGTGCGGAGAATGCCCTCTTGGTCTACCACGAACTTGTCCTTGTGGTAAAACTAGAAAGGTTGCACCCTGTAACGAACCGATTGATACTTGCAACGATACTTGCCAAAATGTACTGGCATGCGGACACCACTACTGCAGCCAAAAGTGTCATAAGGGTGACTGCAGTTTGTGCTTGGCTATCACCAAGAAGAAATGTCGCTGTAGCATGCACGAAAAAGAGATACCGTGTTGGAAGACGTTCTGCTGCGAaaccaaatgcaaaaaaattcgagATTGTGGAAAGCATGCTTGCAACAAAAAGTGCTGCGATGGTCAATGCCCACCATGTGACAAGGTGTGTGGAAAGCCACTATCGTGTAAAAAGCATAAGTGCAACTCTGTTTGCCATGACGGCCCATGTTATCCTTGCAAGCTGAAATCGCAAATCAAATGTCGCTGCGGAACTACGTCAGTTACGGTGCCTTGCGGCAGAGAGCGCAGAGCACGACCCCTCTGCATGGAACTTTGCAGAATCCCATCCAAATGCCATCATCAAAACAAGCACAAATGCCACAAAGGTGATTGCCCTGCGTGTAACCAGAAGTGTGGACTAAAGaacgacaccaccaactgcgaacaTATCTGCGAAGCTCGTTGCCATGCTGCTGTGCGAGTTCCTTTTAAGCAGCCCACTGCCACAAACATATTTGAGTATAAATTTGAGAACTATGAAATCAAGATTCTCCCACACCCGAAATGCGAGAAGAAAGTACTTGTGTCCTGCATTGGTGGACATGAAATTGCCGAATGGCCATGTTGGAATTCGAAGCCTTCCTCCTGTCAACGGTTGTGTGGCCGTAACTTGAAATGTGGCAACCATAAGTGTTCACTTGTTTGTCATAGTGTACCTGATTTGGATGGAGAACATCAACAAGACGGATGCGCTTCATGCCCCGAAGGCTGCCAGATTGAACGTCCCAAGGGCTGCGTTCACCGCTGCCAACGACCATGTCACCTACCGCCATGTGATCCATGTGTCGTTACAATCAAAACAGCCTGCCACTGTGGTCTCTCGCAGGTCTACTACAAATGCTCTGAATACAATTCCCCAAAGGAGACACCCAGTGTTATCTTAGAAAGACAAGAGAAGCTAAAAAGTTGCGGAAATCGTTGTGTCAAAAATTTCCCATGTGATCATCGTTGCTCATCAATCTGTCACTCTGGACCTTGTCCCAATCCACAAAACTGCCGCAAAAAGGTGAAAATCTTTTGCGAATGTAAACGCATCAAAATGGAAGTCTCCTGCGAAAAATCACGTTCTGGTGCTGCGTCTCTACCTTGCGAAGATAAATGTCTGATCAAAAAAGCAGCTTTGGAGAATATCAAACAACAAGAAGCGGAAAAGCTAAGACTGGCCGAGGAGGAACGAAATCGCATCGAACTGGAACAATTCCAGAAGATATTCGGAAAACGAAAACCTCGCGAACGCCGTGTCGTCACACAAGAAATCAAACCAGACAActatcaaacaaaattattatttgccGCTGCAGTCGTACTTGCTGCAGCTTTGGgATGGCCACCAGTTGAAGTACTTTACTTGTAG
- Protein Sequence
- MSTANFAKGNKPTKHGPSASRNSEKSKNKPQTNQFKDIQTKNIEMAKKITENYESSSDEEQLDGGKILAKLYQNYCGGNDQLQKTAAILENVLQSGAAICLICIGSVKRADAVWSCKHCYCVFHLLCVKRWANDSIALLKEKGTEEQGYYNNLGEFVPKKLKTIKWCCPQCRCDYQPEDRPKQYECFCGNEVNPPNQEWLVPHSCGETCGKLLQPECGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPQKKVLRCFQKSWTCDRKCSELLPCGKHKCDQFCHAPDQCPACSKTSRQKCVCGSEEAVKSCSQRVWQCKKVCNKKYSCGIHNCKKVCHDGQCGECPLGLPRTCPCGKTRKVAPCNEPIDTCNDTCQNVLACGHHYCSQKCHKGDCSLCLAITKKKCRCSMHEKEIPCWKTFCCETKCKKIRDCGKHACNKKCCDGQCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKLKSQIKCRCGTTSVTVPCGRERRARPLCMELCRIPSKCHHQNKHKCHKGDCPACNQKCGLKNDTTNCEHICEARCHAAVRVPFKQPTATNIFEYKFENYEIKILPHPKCEKKVLVSCIGGHEIAEWPCWNSKPSSCQRLCGRNLKCGNHKCSLVCHSVPDLDGEHQQDGCASCPEGCQIERPKGCVHRCQRPCHLPPCDPCVVTIKTACHCGLSQVYYKCSEYNSPKETPSVILERQEKLKSCGNRCVKNFPCDHRCSSICHSGPCPNPQNCRKKVKIFCECKRIKMEVSCEKSRSGAASLPCEDKCLIKKAALENIKQQEAEKLRLAEEERNRIELEQFQKIFGKRKPRERRVVTQEIKPDNYQTKLLFAAAVVLAAALGWPPVEVLYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- -
- 80% Identity
- -