Svit025699.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- nfxl1
- Assembly
- GCA_958431115.1
- Location
- OY288110.1:32268287-32273380[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.8e+04 -8.1 6.4 15 19 170 174 169 174 0.82 2 20 0.15 2.9e+03 -0.5 0.8 4 10 205 211 204 211 0.95 3 20 2.4e-08 0.00046 21.2 14.8 1 18 219 235 219 236 0.98 4 20 1.1 2.1e+04 -3.3 1.1 5 10 261 266 261 266 0.93 5 20 9.8e-07 0.019 16.1 13.5 1 19 272 291 272 291 0.95 6 20 0.9 1.7e+04 -3.0 0.8 6 10 316 320 315 320 0.91 7 20 4.5e-07 0.0086 17.1 11.6 1 19 326 344 326 344 0.98 8 20 0.52 9.8e+03 -2.2 1.4 5 10 368 373 368 373 0.95 9 20 3.6e-08 0.00069 20.6 10.0 1 18 379 396 379 397 0.96 10 20 0.31 5.9e+03 -1.5 0.4 1 5 406 410 406 415 0.75 11 20 2.3e-05 0.44 11.7 15.3 1 18 431 448 431 449 0.98 12 20 2.7e-08 0.00051 21.0 13.0 3 19 460 476 452 476 0.85 13 20 1.1 2e+04 -3.2 0.6 5 10 503 508 503 508 0.78 14 20 0.00068 13 7.0 11.3 8 19 520 531 512 531 0.87 15 20 0.19 3.7e+03 -0.9 5.4 3 11 544 552 534 553 0.82 16 20 0.27 5.1e+03 -1.3 1.1 6 10 611 615 610 615 0.90 17 20 1.1e-05 0.2 12.7 6.0 1 12 621 632 621 632 0.97 18 20 1.9 3.5e+04 -4.0 0.8 15 19 645 649 645 649 0.75 19 20 6.7e-05 1.3 10.2 13.3 4 18 662 676 660 677 0.93 20 20 4.9e-06 0.094 13.8 12.3 1 17 728 746 728 748 0.86
Sequence Information
- Coding Sequence
- atGGCTTCCAACATATCCAAAGCAAACAAACCAAAAAGTATTCCAACCAGTACCAGcacaaccaacaaaaaacaagaaaatgccAATAAGTCGCAACCATCCAAAAAATTCaaggaaattcaaaataaaaacatggaaATGgccaaaaaaataacagaaaactaCGAGTCTAGTTCTGATGAAGAAGAACTCGATGGTGGAAAAATCCTGGaaaaattgtacaaaaactACACTGGTGGAAATGATCAACTCCAAAAAACTGCAGCTTTTCTTGAAAATGTATTACAGTCAGGATCTGCAATATGCTTGATTTGCATTGGTTCGGTAAAGAGGGCGGATGCGGTTTGGTCCTGTAAATTCTGCTACTGTGTGTTCCATTTGTTGTGTGTCAAGAGGTGGGCAAACGATAGTATTGCTTTGCTCAAAGATAAAGGCACTGAGGAACAAGGATATTACAATAACTTGGGTGAATTTattccgaaaaaaattaaagctgtaAAGTGGTGTTGTCCACAATGTCGACGGGACTATCAACCCCAAGATAGACCAACTCAATATGAGTGCTTTTGTGGCAAAGAAGTTAACCCTATTAATCAGGAATGGATAGTTCCACATTCATGTGGTGAAACATGTGGAAAGCCATTGCAACCTGAATGTGGTCACAAATGTTTGCTTCTATGCCATCctggcCCATGTCCTCCATGTGCTCAGAGCATATTTTCAAGCTGCAAATGTGGAAAATCTCAACCTAAAACGCTTCGTTGCTTTCAAAAGACATGGACATGCGATAGGAAATGCTTACATGTTCTTCCTTGTGGCAAGCACAAATGTGACCAAGTTTGTCATTCGGACAAGCAATGTCCCCCATGCAGCAAATCTAGTCGTCAGAAATGCGTTTGTGGCAATGAGGAAGCAGTTAAAAACTGCTCGCAGAAAGTCTGGCATTGCAAGAAAGtctgcaacaaaaaatatagctgTGGTATACACAGTTGCAAGCGAGTTTGTCATGACGAGGAATGCGGTGATTGTCCGTTGAGCCTTCCAAGATCATGTCCATGTGGAAAAACGagaaaaacAGCACCCTGCAACGAACCAATAGATACTTGTGAAGATACTTGCTATAAGTTACTCTCTTGTGGAAAGCATTATTGTACACAACGTTGTCATAAAGGCGATTGCAGCTtgtgTTTGATTGTGACGAAAAAGACATGTCGCTGTGGTATGCATGAAAAAGAGCTACCGTGTTGGAAGGCTTTCAGTTGCGAGACAAAATGCAAGAAGACCCGAGACTGTGGAAAGCATGCTTGCAACaaaaagtgcTGTGATGATCAATGCCCACCATGTGATAAGGTTTGCGGAAAATTACTATCTTGTAAAAAACACAAATGCAGTTCTGTTTGTCACGATGGTCCGTGTTATCCTTGTAAACTACAATCTCAAGTTAAATGTCGCTGTGGAAGTACCTGTATAACAGTTCCATGTGGTAGAGAGCGTAGAGCTCGACCAAACTGCATGGAACCCTGCAGaattccTTCCAAATGCCATCaccaaaataaacataaatgccACAAGGGCGATTGCCCATCATGTAGTCAAGTGTGTGGATTGAAAAATGATACCACAAATTGTCAACATTTATGTACAGCTCGTTGTCATGCTGCTGTAAAGATGCCCTTAAAAAATAATCCTAGTAATATATTTGAATACAAGTTCGATAATTACGAAATAAAACAACTACCACATCCGAAATGTGAAAAGAAAGTACCGGTTGCCTGTATCGGTGGTCATGAGATTGCCGAATGGCCATGTTGGAATTCTAAGCCGACTTCATGTCAGCGTGTTTGTGGCCGTAATCTAAAGTGTGGCAATCATAACTGCTCTCTAGTTTGCCACAAGGTACCTAGCCTCGATGATAAAAATgAACAAGAAGGTTGTGGATCATGCAGAGAAGGATGCGAAATTAAACGACCACCAGGTTGTGTTCACCGTTGCAAAAAATCTTGTCATCCGTCGCCATGTGATCCGTGCCTTGCACAAATTAAAGCAAATTGTCATTGTGGGCTAACTCAAGTCTATTACAAATGCTCGGAATATTATTCAACTAACGGTGCTACCCAAGATATTGAAGAAcgccaagaaaaattaaaaagttgcgGAAATCGTtgcattaaaaattatcCATGTGGTCACCGTTGCTCAGCTGAATGTCATTCAGGGTCATGTCCAAATCCACAAAACTGTcgtaaaaagataaaaatttactGCGAATGCAAACGCATTAAAATTGAGGTCTCTTGTGAAAAATCCCGATCAAAGGATTCATTTATACCTTGCGATGATATATGTCAAGACATAAAAGCCGATTCAGAAAGAATCAAACATGAAGAAGCTGAAAAACAGAGACTTGCCGAAGAGGAACGTAATCGCATCGAATTGGAACAATTTGAGAAGAGATTTGGCAAACGAAAACCAAGGGAACGTAAAGCAATTGCACAAGAAATcaaaactaataataatcaAATGAAAGTGCTGATTGGAACTGCAGCAGCTGTAGTTGTTGCTgcaattctaattttttatttttatttataa
- Protein Sequence
- MASNISKANKPKSIPTSTSTTNKKQENANKSQPSKKFKEIQNKNMEMAKKITENYESSSDEEELDGGKILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAVWSCKFCYCVFHLLCVKRWANDSIALLKDKGTEEQGYYNNLGEFIPKKIKAVKWCCPQCRRDYQPQDRPTQYECFCGKEVNPINQEWIVPHSCGETCGKPLQPECGHKCLLLCHPGPCPPCAQSIFSSCKCGKSQPKTLRCFQKTWTCDRKCLHVLPCGKHKCDQVCHSDKQCPPCSKSSRQKCVCGNEEAVKNCSQKVWHCKKVCNKKYSCGIHSCKRVCHDEECGDCPLSLPRSCPCGKTRKTAPCNEPIDTCEDTCYKLLSCGKHYCTQRCHKGDCSLCLIVTKKTCRCGMHEKELPCWKAFSCETKCKKTRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCSSVCHDGPCYPCKLQSQVKCRCGSTCITVPCGRERRARPNCMEPCRIPSKCHHQNKHKCHKGDCPSCSQVCGLKNDTTNCQHLCTARCHAAVKMPLKNNPSNIFEYKFDNYEIKQLPHPKCEKKVPVACIGGHEIAEWPCWNSKPTSCQRVCGRNLKCGNHNCSLVCHKVPSLDDKNEQEGCGSCREGCEIKRPPGCVHRCKKSCHPSPCDPCLAQIKANCHCGLTQVYYKCSEYYSTNGATQDIEERQEKLKSCGNRCIKNYPCGHRCSAECHSGSCPNPQNCRKKIKIYCECKRIKIEVSCEKSRSKDSFIPCDDICQDIKADSERIKHEEAEKQRLAEEERNRIELEQFEKRFGKRKPRERKAIAQEIKTNNNQMKVLIGTAAAVVVAAILIFYFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00984705;
- 80% Identity
- -