Cpag015003.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cheilosia pagana
Gene Symbol
nfxl1
Assembly
GCA_936435595.1
Location
CAKZFE010000056.1:4502-7666[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 2.1e+04 -8.1 6.4 15 19 162 166 161 166 0.82
2 20 0.22 1.6e+03 -0.5 0.8 4 10 197 203 196 203 0.95
3 20 3.6e-08 0.00026 21.2 14.8 1 18 211 227 211 228 0.98
4 20 1.6 1.2e+04 -3.3 1.1 5 10 253 258 253 258 0.93
5 20 5.9e-08 0.00042 20.5 13.1 1 19 264 283 264 283 0.98
6 20 2 1.5e+04 -3.6 1.8 6 10 308 312 307 312 0.89
7 20 6.3e-09 4.5e-05 23.6 13.7 1 19 318 336 318 336 0.99
8 20 1.4 9.8e+03 -3.0 0.9 5 10 360 365 360 365 0.93
9 20 3.2e-08 0.00023 21.4 10.1 1 18 371 388 371 389 0.96
10 20 0.63 4.5e+03 -1.9 0.4 1 5 398 402 398 407 0.84
11 20 4e-07 0.0028 17.9 16.9 1 18 423 440 423 441 0.98
12 20 1.1e-07 0.00075 19.7 14.5 3 19 452 468 444 468 0.85
13 20 0.0054 38 4.7 11.0 8 18 512 522 504 523 0.86
14 20 0.078 5.5e+02 1.0 5.2 3 11 536 544 526 545 0.83
15 20 0.49 3.5e+03 -1.6 0.9 6 10 604 608 603 608 0.90
16 20 3.3e-06 0.024 14.9 5.6 1 12 614 625 614 625 0.97
17 20 1.2 8.3e+03 -2.8 1.4 15 19 638 642 637 642 0.88
18 20 1.5e-05 0.11 12.8 14.2 3 19 654 670 653 670 0.94
19 20 3 2.1e+04 -5.1 1.3 10 13 677 680 675 680 0.70
20 20 6.2e-06 0.044 14.1 11.7 4 17 723 739 720 741 0.83

Sequence Information

Coding Sequence
ATGTCATCTTCGAATTTACCAAaaggaagcaaacaaaaaaaacaagcagcaatcgcatcaaaaaatgcagaaaagccaaataaatttaaagaaattcaaactaaaaacattgaacTGGCAAAAAAAATTACGGAGAACTACGAATCTAGTTCTGACGAGGATCAAATTGACGGTGGCAGCATTTTAGAAAAGCTCTACAAGAACTACACCGGCGGAAATGATCAGCTTCAGAAGACAGCTGCGTTTCTGGAGAATGTCTTGCAATCTGGCTCAGCTATATGCCTTATATGCATTGGCTCAGTAAAGAGGGCCGATGCGGTTTGGTCTTGCAAATACTGTTATTGTGTGCTTCATCTGTTGTGTATAAAACGTTGGGCTAACGATAGTGTAGCCTTGTTGAAGGAAAAAGGAACAGAGGAACAGGGCTATTACAACAATTTGGGCGAATTCATTCCCAAGAAGGTAAAAGCGGTCAAATGGTGTTGTCCGCAATGTCGTCAAGACTATCAGCCCGACGAACGACCGACACAATATGAATGTTTTTGCGGCAAAGAAGTCAATCCGCCAAATCAAGAGTGGCTAGTACCGCATTCCTGCGGTGAGACTTGTGAAAAGCCATTGCAACCACAATGTGGACACAAATGCTTACTACTTTGTCATCCAGGTCCTTGTCCTCCTTGTGCTCAGAATATAGTAGTGAGTTGCAAATGTGGCAAGTCTCCGAAGAAAGCCTTGCGATGTTTTCAAAAAAGTTGGACTTGCGACAGAAAGTGCTTAGAGATTCTGCCATGTGGAAAGCACAAATGTGATCAGATTTGTCATGTACCGGGACAGTGTCCAGCTTGCAGTAAGACCAGTCGTCAGAAATGTGTTTGTGGAAGCGAGGAAGCAGTAAAGAGCTGCTCGCAACGTCTATGGCAATGCAAGAAGGTCTGCAACAAAAAGTATACTTGTGGCATTCATAGCTGTAAAAAAGTGTGTCATGTTGGTCAGTGTGGAGAGTGCCCTCTAGGTCTTCCAAGAACATGCCCTTGTGGTAAAACTAAAAAGATCGCACCCTGCAATGAGCCAATAGATACCTGCAATGACACTTGCCAAAATTTGCTCTCATGCGGACAGCACTATTGCAGCCAGCGTTGTCATAAGGGCGATTGCAGCTTGTGTCTGAttataacaaagaaaaaatgtcGTTGTGGCATGCACGAAAAGGAAATACCGTGTTGGAAGTCGTTTTGCTGCGAAACTAAATGCAAAAAGGTTCGAGACTGCGGAAAGCATGCTTGCAACAAAAAGTGCTGTGATGGTCAGTGTCCACCGTGTGACAAGGTGTGTGGAAAGCCGCTTTCGTGTAAAAAACACAAGTGTAACTCTGTATGCCACGATGGCCCATGTTATCCGTGCAAGATAAAATCACAAGTCAAATGTCGCTGCGGAAGTACAAGCGTTACGGTGCCCTGTGGGCGCGAGCGTAAAGCACGCATCGGTTGCATGGAACTGTGCAGAGTTCCCTCCAAATGTCATcatcaaaataaacataaatgccACAAGGGCGAGTGTCCTGCGTGCAATCAAAAATGTGGACTGCGAAATGACACAACCAATTGCCAACATATCTGTGAGGCTCGTTGTCATGCGGCTGTGAGAGTTGCCCTCAAACAATCCACTGCCACTAACATATTTGAGTACAAATTTGAGAATTATGAAGTGAAAAATCTACCACATCCAAAATGCGAGCAGAAAGTTATGGTGTCCTGTATTGGAGGGCATGAGATAGCGGAATGGCCATGTTGGAATTCAAAGCCTAATTCATGCCAAAGGTTGTGTGGACGCAACTTACAATGTGGCAACCATACGTGTTCGCTTGTTTGTCACAGTGTACCTGCTCTAGATGAAAACCAGCAACAGGAAGGCTGCAAGCCATGTTCCGACGGATGTCTGATCAAACGGCCACCAGGTTGTATACATCGCTGCAAACGACCATGTCACCCAGCACCATGCGATCCATGCTCAGTGACGACTAAGGCAATGTGTCACTGTGGTCTTTCGCAAGTTTATTACAAATGTTCCGAATACTTTTCCTCGGAGGGAACACCAAATGATATTCTCAAACGACAAGAGGAGCTAAAAAGCTGCGGAAATCGTTGCATCAAAAATtTCCCATGTGATCATCGTTGCTCCTCCATCTGCCACTCGGGACCATGTCCTAATCCGCAAAACTGCCGTAAAAAGGTGAAAATCTACTGCGAATGTAAACGCATCAAAATGGAAGTTTCCTGTGAGAAATCTCGTTCCGGTACTGCGTCCATACCATGCGACGACAACTGTATAGTCACCAAAGCTGCTTTGGAGCAAATCAAGCAACAAGAAGCTGAAAAACAACGACTCGCCGAAGAGGAACAGAACCGCATTGAATTGGAACAATTTGAGAAGAGATTCGGCAAACGAAAACCTCGCGAACGTCGCGTTATCGCACAAGAAGTCCAGACCGACAATAACAAAATGAAGATATTAATTGTCGCAGCAGTTGTACTAACCGCCGCTGTTGGCTTGGGGCTTTATTGTTACCAGTAA
Protein Sequence
MSSSNLPKGSKQKKQAAIASKNAEKPNKFKEIQTKNIELAKKITENYESSSDEDQIDGGSILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRADAVWSCKYCYCVLHLLCIKRWANDSVALLKEKGTEEQGYYNNLGEFIPKKVKAVKWCCPQCRQDYQPDERPTQYECFCGKEVNPPNQEWLVPHSCGETCEKPLQPQCGHKCLLLCHPGPCPPCAQNIVVSCKCGKSPKKALRCFQKSWTCDRKCLEILPCGKHKCDQICHVPGQCPACSKTSRQKCVCGSEEAVKSCSQRLWQCKKVCNKKYTCGIHSCKKVCHVGQCGECPLGLPRTCPCGKTKKIAPCNEPIDTCNDTCQNLLSCGQHYCSQRCHKGDCSLCLIITKKKCRCGMHEKEIPCWKSFCCETKCKKVRDCGKHACNKKCCDGQCPPCDKVCGKPLSCKKHKCNSVCHDGPCYPCKIKSQVKCRCGSTSVTVPCGRERKARIGCMELCRVPSKCHHQNKHKCHKGECPACNQKCGLRNDTTNCQHICEARCHAAVRVALKQSTATNIFEYKFENYEVKNLPHPKCEQKVMVSCIGGHEIAEWPCWNSKPNSCQRLCGRNLQCGNHTCSLVCHSVPALDENQQQEGCKPCSDGCLIKRPPGCIHRCKRPCHPAPCDPCSVTTKAMCHCGLSQVYYKCSEYFSSEGTPNDILKRQEELKSCGNRCIKNFPCDHRCSSICHSGPCPNPQNCRKKVKIYCECKRIKMEVSCEKSRSGTASIPCDDNCIVTKAALEQIKQQEAEKQRLAEEEQNRIELEQFEKRFGKRKPRERRVIAQEVQTDNNKMKILIVAAVVLTAAVGLGLYCYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223893;
90% Identity
iTF_00313122;
80% Identity
iTF_00312264;