Spyr006224.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- nfxl1
- Assembly
- GCA_905146935.1
- Location
- LR989929.1:60529647-60532914[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.2e+04 -8.1 6.4 15 19 168 172 167 172 0.82 2 19 0.51 8.2e+03 -2.2 0.7 4 10 203 209 203 209 0.92 3 19 1e-08 0.00017 22.4 14.5 1 18 217 233 217 234 0.98 4 19 0.61 9.8e+03 -2.5 2.1 5 10 259 264 259 264 0.95 5 19 8.5e-07 0.014 16.3 13.6 1 19 270 289 270 289 0.93 6 19 0.89 1.4e+04 -3.0 0.8 6 10 314 318 313 318 0.91 7 19 2.1e-09 3.5e-05 24.6 12.5 1 19 324 342 324 342 0.99 8 19 0.52 8.4e+03 -2.2 1.4 5 10 366 371 366 371 0.95 9 19 3.6e-08 0.00058 20.6 10.0 1 18 377 394 377 395 0.96 10 19 0.31 5e+03 -1.5 0.4 1 5 404 408 404 413 0.75 11 19 2.3e-05 0.37 11.7 15.3 1 18 429 446 429 447 0.98 12 19 2.9e-08 0.00046 21.0 12.6 3 19 458 474 450 474 0.85 13 19 1.1 1.7e+04 -3.2 0.6 5 10 501 506 501 506 0.78 14 19 0.00093 15 6.5 11.3 8 18 518 528 510 529 0.86 15 19 0.33 5.4e+03 -1.6 5.1 3 11 542 550 532 551 0.84 16 19 0.33 5.3e+03 -1.6 0.9 6 10 609 613 608 613 0.90 17 19 1.7e-05 0.28 12.1 5.8 1 11 619 629 619 630 0.96 18 19 0.00012 1.9 9.4 14.2 3 18 659 674 658 675 0.94 19 19 1.8e-06 0.029 15.2 13.3 1 17 726 744 726 746 0.86
Sequence Information
- Coding Sequence
- ATGGCTTCTAACATTTCCAAAGCAAACAAACCAAAAAATGCACCTTCCAGCACAACCAACAAAAAACCAGAAAATTCCAATAAATCCCAACAATCGAAAAAATTCAAAGAAATACAAAATAAGAACATGGAAATGGCCAAGAAAATCACAGAAAACTATGAGTCCAGTTCTGACGAAGAAGAACTGGATGGTGGTAAAATCTTGGAAAAATTGTACAAAAACTACACAGGTGGAAATGATCAACTGCAAAAAACTGCAGCTTTTCTAGAAAACGTTTTGCAATCGGGGTCTGCAATATGCCTCATTTGCATTGGATCGGTTAAGAGGATGGATGCAATTTGGTCTTGCAAGTATTGCTACTGTGTGTTCCATTTGACGTGTGTTAAGCGATGGGCAAACGACAGTATCGCGTTGCTAAAAGATAAAGGCACCGAAGATCAAGGATATTACAATAATCTGGGTGAATTCATTCCTAAAAAGATTAAAGCTGTAAAGTGGTGTTGTCCGCAATGTCGACGGGACTATCAACCTCAAGAGAGACCAACTCAATATGAGTGCTTTTGTGGCAAAGAAGTCAACCCCGTCAATCAGGAATGGATAGTACCCCATTCGTGTGGAGAGTCTTGTGAAAAACCACTGCAACCTGAATGTGGGCACAAGTGTATGCTTCTCTGTCATCCTGGTCCCTGTCCTCCCTGTGCTCAGAGTATATTTTCAAGTTGCAAATGCGGAAAATCTCCACCGAAAACACTTCGTTGTTTCCAAAAGACTTGGACATGCGAAAGAAAATGCCTGCAGGTTCTTCCTTGTGGCGAACACAAATGTGAACAAGTTTGCCATTCGGCTAAACAATGCCCGCCATGTAGTAAGTCGAGTCGTCAAAAATGTGTTTGTGGCAATGAAGAAGCCACCAAAAACTGCTCGCAAAGAATTTGGCATTGCAAGAAGGTGTGTAACAAAAAATACAGATGTGGTATTCATAGTTGCAAACAGGTTTGCCATGATGGGGCATGCGGTGATTGTCCGCTTAGCCTTCCAAGATCCTGTCCATGTGGAAAAACTAGAAAAACAGCGCCTTGTAATGAATCAATCGATACCTGCGAAGACACTTGTTTGAAGTTGCTCTCGTGTGGAAAACATTATTGCACGCAACGTTGCCATAAAGGCGATTGCAGCTTGTGTTTAATTGTTACAAAAAAGAAATGTCGCTGTGGTATGCATGAAAAGGAATTACCATGTTGGAAGTCATTCAGCTGTGAGACAAAATGCAAGAAAATTCGAGACTGTGGGAAGCATGCTTGCAACAAAAAGTGCTGCGATGATCAATGTCCACCATGTGACAAGGTTTGCGGAAAATTGCTGTCTTGCAAAAAGCACAAGTGCGCTTCAGTTTGTCACGATGGTCCGTGCTATCCTTGTAAATTGCAGTCCCAAGTTAAATGTCGTTGTGGAAGTACTTGTATAACGGTTCCCTGTGGCAGAGAACGTAGAGCTCGACCCAATTGTATGGAACCCTGCAGAATTCCCTCCAAATGCCATCATCAAAATAAACACAAATGTCACAAGGGCGATTGTCCATCATGCAATCAAGTGTGTGGATTAAAAAATGCCACCACTAATTGTGAACACTTGTGTACAGCCCGATGTCATGCCGCTGTAAAGATTCCCCTAAAGAATAATCCGAACAATATATTTGAATATAAGTTCGATAATTATGAAATCAAACAAATGCCTCATCCAAAATGTGAAAAGAAGGTAATGGTTCCATGCATAGGTGGCCACGAGATTGCAGAATGGCCATGTTGGAATTCTAAGCCAAGTTCATGTCAACGTCTTTGTGGTCGCACATTGAAATGTGGCAATCATAATTGCTCTCTAGTTTGTCACAACGTAGCTAATCCCGATGATAAAAATCAACAGGAGGGCTGTGGACAATGCCTAGAAGGATGCGAAATTAAACGGCCCCCAGGGTGTATTCATCGTTGTAAGAAATCTTGTCATCCACCTCCATGTGACCCGTGCCTTGCGCAAATTAAAACAAACTGTCATTGTGGACTGACGCAGGTTTATTACAAATGTTCAGAATACAACTCAATAGAAGGTGTAACTCAGGACATTGAGGAACGCCAGGAAAAATTAAAGAGTTGCGGAAATCGTTGCATCAAAAACTACTCCTGTGGCCACCGATGTTCGGCTGAGTGTCATTCAGGACCCTGTCCAAATCCGCAAAACTGTCGTAAAAAGGTGAAAATCTACTGCGAATGCAAGCGCATTAAAATGGAAGTCTCTTGTGAAAAGTCTCGATCCAAGGATACAATCATACCTTGCGATGATGTGTGTCAAGCCATCAAAACTCAAACTGAAAAAATCAAACACGAAGAAGCTGAAAAACAAAGACTTGCCGAACAGGAACGAAACCGCATCGAATTGGAACAATTTGAAAAGAGATTTGGCAAACGAAAACCAAAGGGACGTAAAGTTGTCGCACAGGAAGTCAAAACAAACAACAATCAAATGAAATTGCTGATTGGAACTGCAGCAGCTGTTGTCGTAGTTGCAGTGATTTTTTTTTATTTTTATTTATAA
- Protein Sequence
- MASNISKANKPKNAPSSTTNKKPENSNKSQQSKKFKEIQNKNMEMAKKITENYESSSDEEELDGGKILEKLYKNYTGGNDQLQKTAAFLENVLQSGSAICLICIGSVKRMDAIWSCKYCYCVFHLTCVKRWANDSIALLKDKGTEDQGYYNNLGEFIPKKIKAVKWCCPQCRRDYQPQERPTQYECFCGKEVNPVNQEWIVPHSCGESCEKPLQPECGHKCMLLCHPGPCPPCAQSIFSSCKCGKSPPKTLRCFQKTWTCERKCLQVLPCGEHKCEQVCHSAKQCPPCSKSSRQKCVCGNEEATKNCSQRIWHCKKVCNKKYRCGIHSCKQVCHDGACGDCPLSLPRSCPCGKTRKTAPCNESIDTCEDTCLKLLSCGKHYCTQRCHKGDCSLCLIVTKKKCRCGMHEKELPCWKSFSCETKCKKIRDCGKHACNKKCCDDQCPPCDKVCGKLLSCKKHKCASVCHDGPCYPCKLQSQVKCRCGSTCITVPCGRERRARPNCMEPCRIPSKCHHQNKHKCHKGDCPSCNQVCGLKNATTNCEHLCTARCHAAVKIPLKNNPNNIFEYKFDNYEIKQMPHPKCEKKVMVPCIGGHEIAEWPCWNSKPSSCQRLCGRTLKCGNHNCSLVCHNVANPDDKNQQEGCGQCLEGCEIKRPPGCIHRCKKSCHPPPCDPCLAQIKTNCHCGLTQVYYKCSEYNSIEGVTQDIEERQEKLKSCGNRCIKNYSCGHRCSAECHSGPCPNPQNCRKKVKIYCECKRIKMEVSCEKSRSKDTIIPCDDVCQAIKTQTEKIKHEEAEKQRLAEQERNRIELEQFEKRFGKRKPKGRKVVAQEVKTNNNQMKLLIGTAAAVVVVAVIFFYFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223893;
- 90% Identity
- iTF_00694276;
- 80% Identity
- -