Ecav016700.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ectemnius cavifrons
Gene Symbol
Lrrfip2
Assembly
GCA_964023945.1
Location
OZ030388.1:6622165-6624454[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-115 4.7e-111 370.9 36.4 1 300 29 327 29 327 0.98
2 3 0.0027 52 3.1 3.2 122 172 327 377 325 384 0.91
3 3 0.042 8e+02 -0.8 5.6 194 238 358 401 339 402 0.57

Sequence Information

Coding Sequence
ATGGAGTCTGCGATCGCTGGACGCCGGAGGACTGCCACTAGGCATTCTGCCGAAGACCAGGCCCTCGATCAAATAGCCAAGGAGGCGGAGGCTAGATTAGCAGCTAGGAGGCAAGCCAGAGCCGAGGCCAGGGAAATACGGATGCGCGAGATCGAAAGACAACAGAAGGAGGCTGAGGAGAATGCAGACAGGGTTTACGACATGTGTACAGCAGACGTGAATCGAACGATGAGGGTGACACCGGACTCCGTGCGTACGTCGCGTCTCCTCACAAACTCCAACAACTTCCAATCGAGTCGGCGTTCCTCCGAAGACTCGCTGGAGGATGCTGGATTGAGCAGAGATCTCAGGTTAGAACTCAAGGAATTCGAGGAGAAATTCCGCAAGGCAATGATAGCGAATGCTCAGCTCGACAATGAGAAGTCCTCCTACTCTTACCAGGTGGATCTCCTGAAAGATAAACTAGAAGAACTGGAGGAGACTGCCGCGCAATTGCGTCGGGAACTTCGCGAGAAGAATCGCGAAGCTGAACAATTGAAGCGAGTCAGTCAAAGATTGAAGGAAGACTTAGATCTATGCAGAGCACAACTATTAGAACGAGATACGCTTATACAAGAAAATGGTTTAGTTATTATTGATGATGAGGAGAGCGACAACGAAGAGAACGCTGTCGAGAATGGTCCACGTCCGAGGAGGAGAGTACTAGTCAGTACCGAAGCAGCGGAGTTATTAGAAACAGCTGGAAAAGGATCGTTAGATGTCCGGCTGAGAAAGTTCGCTTCTGAAAAGAAGGAGTTGCAGGATGAAATACGGCATTTACGATTGGAACTGGAAGAGACCCGAAATCGTATTAGGTCTGAGAGATCACCCGGTTCGGTATTAGGTTGTCTCTCAGATTCCGAGGACGTTCAACGGGAAGCAAATAAATTGCTGGCAGATTATAAATTCAAGCTACAGAAAGCAGAGCAGGACATGTCGACTTTGCAAGCGACAGTAGCAAGGCTTGAGAGCCAAGTGATACGCTACAAGTCAGCTGCAGAAGCCTCCGAGAAAGCGGAGGATGAGCTCAAAGTCGAGAAGAGAAAACTACAGAGAGAAGTGAGAGAAACGCAGGGTCGCGTGGAAGAATTGGAGACAGCTAATTCCCATTTACAGAGGCGATTGGATAAATTGAAGAATGCGAAATCCGCCCTTCTCAAGGAACTCTGA
Protein Sequence
MESAIAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMREIERQQKEAEENADRVYDMCTADVNRTMRVTPDSVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRVSQRLKEDLDLCRAQLLERDTLIQENGLVIIDDEESDNEENAVENGPRPRRRVLVSTEAAELLETAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305050;
90% Identity
iTF_00220577; iTF_00226593; iTF_01420930; iTF_00873797; iTF_00219110; iTF_00224550; iTF_00229351; iTF_00141224; iTF_00216392; iTF_00227272; iTF_01417704; iTF_00140585; iTF_00221258; iTF_00215019; iTF_00230027; iTF_00233227; iTF_00231980; iTF_01418348; iTF_00217070; iTF_00982288; iTF_00225233; iTF_00217746; iTF_01420274; iTF_00223187; iTF_00983603; iTF_01418995; iTF_00219796; iTF_00221908; iTF_00231316; iTF_00218421; iTF_00982965; iTF_00214390; iTF_01419639; iTF_00215705; iTF_00225913; iTF_00232602; iTF_00222523; iTF_00227965; iTF_00228669; iTF_00142462; iTF_00141823; iTF_00223872; iTF_00230688; iTF_00770370; iTF_01198663; iTF_01199403; iTF_00292268; iTF_00252068; iTF_01473924; iTF_00298309; iTF_00255079; iTF_00296778; iTF_00294476; iTF_00297549; iTF_00295246; iTF_00296014; iTF_00252815; iTF_00291535; iTF_00292946; iTF_01395122; iTF_00254323; iTF_00293719; iTF_01473177; iTF_01475449; iTF_01130812; iTF_00253565; iTF_01474686; iTF_01069666; iTF_01068295; iTF_01068972; iTF_01066254; iTF_01067608; iTF_01066939; iTF_01070363; iTF_01065568; iTF_00084549; iTF_00086277; iTF_00088821; iTF_00087158; iTF_00087996; iTF_00085374; iTF_01498218; iTF_01169167; iTF_01539600; iTF_00769619; iTF_00452574; iTF_01087197; iTF_00625492; iTF_00183283; iTF_00676019; iTF_00118007; iTF_00760978; iTF_00303029; iTF_00306265; iTF_00391289; iTF_00393598; iTF_01255545;
80% Identity
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