Epru017381.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000012.1:1242883-1245661[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-115 8.2e-111 370.9 35.5 1 300 29 328 29 328 0.96 2 3 0.0028 89 3.0 3.1 122 171 328 377 326 381 0.92 3 3 0.051 1.6e+03 -1.1 5.6 195 238 360 402 347 403 0.57
Sequence Information
- Coding Sequence
- ATGGAGTCTGCTATAGCTGGACGTAGGCGGACGACCGCGCGACATTCGGCTGAGGATCAGGCTCTCGATCAGATAGCCAAGGAGGCAGAAGCTAGATTAGCCGCTAGAAGACAGGCGAGAGCGGAAGCAAGGGAAATACGAATGCGGGAGTTAGAGAGGCAACAGAAAGAGGCAGAGGAAAATGCGGATAGGGTGTACGATATGTGTTcagCCGACGTGAATAGAACGATGAGAGTAACTCCCGATTCCGTGAGGACATCGCGCCTCCTCACGAACTCCAACAACTTTCAATCCAGTCGTAGATCGTCGGAAGATTCGCTGGAAGATGCCGGCCTAAACAGAGATCTCAGGCTAGAGTTGAAAGAGTTCGAGGAGAAGTTCAGGAAAGCGATGATCGCGAACGCTCAGCTAGACAACGAAAAGTCTTCGTATGCTTATCAAGTTGATCTGTTGAAAGACAAGTTGGAGGAATTGGAGGAGACGGTGGCGCAACTCCGTCGGGAGCTTAGGGAGAAGAATCGGGAGTCGGAACAGTTGAAAAGACTCAGTCAAAGATTGCAAGACGAGTTAGACGTATGCCATGCACAACTATTAGAAAGAGATACGCTTATACAAGAAAACGGTTTAGTAATTATCGACGACGAAGAAGGGAGCGAAAACGAGGATAACGATGTCGAGAATGGCCCGCGTCCAAGACGAAGAGTACTAGTCAGCACAGAAGCAGCGGAGCTACTGCAAAATGCTGGGAAGGGTTCGCTAGATGTCCGACTGAGAAAATTTGCTTCCGAAAAGAAGGAGCTGCAAGACGAGATACGGCATCTAAGATTGGAGTTGGAGGAGACGAGGAATCGCATTAGGTCCGAGAGATCGCCTGGTTCAGTATTAGGTTGTTTATCAGACTCCGAAGACGTGCAACGAGAAGCGAATAAACTCCTGGCCGATTACAAGTTCAAGCTGCAAAAAGCTGAACAGGACATGTCCACTTTGCAAGCCACCGTGGCCAGGCTAGAGAGTCAGGTGATACGTTACAAATCCGCAGCGGAGGCGTCCGAGAAGGCGGAGGACGAGTTGAAAGTCGAAAAGAGAAAATTACAAAGAGAAGTGAGGGAGACACAAGGCCGCGTGGAAGAATTGGAGACGGCAAACTCTCATTTGCAGAGGCGATTGGATAAGCTGAAAAACGCGAAATCCGCCCTGCTGAAGGAGCTTTGA
- Protein Sequence
- MESAIAGRRRTTARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADVNRTMRVTPDSVRTSRLLTNSNNFQSSRRSSEDSLEDAGLNRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRESEQLKRLSQRLQDELDVCHAQLLERDTLIQENGLVIIDDEEGSENEDNDVENGPRPRRRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -