Basic Information

Insect: Bombus consobrinus
Gene Symbol: Lrrfip2
Assembly: GCA_014737455.1
Location: JACXIU010000076.1:4796380-4801453[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-115 3.7e-111 371.1 34.6 1 300 29 327 29 327 0.97

2 3 0.0024 39 3.2 2.9 122 172 327 377 325 382 0.92

3 3 0.051 8.3e+02 -1.1 5.4 195 238 359 401 348 402 0.56

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-115	3.7e-111	371.1	34.6	1	300	29	327	29	327	0.97
2	3	0.0024	39	3.2	2.9	122	172	327	377	325	382	0.92
3	3	0.051	8.3e+02	-1.1	5.4	195	238	359	401	348	402	0.56

Sequence Information

Coding Sequence: ATGGAGTCTGCTATAGCTGGACGTAGGCGGACAACCGCACGACATTCAGCAGAGGATCAGGCTCTCGATCAGATAGCCAAGGAGGCAGAAGCTAGATTAGCTGCTAGAAGACAGGCAAGAGCGGAAGCTAGAGAAATACGAATGCGGGAGTTAGAAAGACAACAGAAAGAGGCAGAGGAAAATGCAGATAGGGTGTACGACATGTGTTCAGCTGATGTGAATAGAACAATGAGAGTAACACCTGATTCTGTGAGGTCGTCGCGTCTCCTCACGAATTCTAACAATTTTCAATCCAGTCGAAGATCTTCCGAAGATTCACTGGAAGATGCTGGCCTAAGCAGAGACCTCAGGTTAGAATTGAAAGAATTTGAAGAAAAATTTAGAAAGGCGATGATAGCCAATGCCCAGTTAGACAATGAAAAATCTTCGTATGCTTATCAAGTCGATCTATTGAAAGACAAATTGGAGGAACTAGAGGAGACGGTTGCACAACTTCGTAGGGAGCTTAGAGAAAAGAATCGTGAGTCTGAACAGTTAAAAAGACTCAGTCAAACATTGAAAGACGAGTTAGATGTATGCCATGCACAATTAATAGAAAGAGATACGCTTATACAAGAAAACGGTTTAGTTATTGTCGACGATGAAGGAAGTGAAAACGAAGATAATGAAATTGAGAACGGTCCACGTCCAAGACGAAGAGTACTAGTCAGTACAGAAGCAGCAGAATTATTGCAAAACGCTGGGAAGGGTTCACTAGATGTCCGGCTGAGAAAATTTGCTTCTGAAAAAAAAGAATTGCAAGATGAGATACGACATCTTAGATTGGAACTAGAGGAGACAAGAAATCGTATTAGGTCCGAAAGATCGCCTGGTTCAGTATTAGGTTGCTTATCAGACTCCGAAGATGTGCAACGTGAAGCAAACAAGCTTTTGGCCGATTACAAATTCAAGATTCAAAAAGCTGAACAAGATATGTCTACTTTGCAAGCTACTGTAGCCAGGCTAGAAAGTCAAGTAATACGTTATAAGTCAGCAGCAGAGGCATCTGAAAAAGCGGAGGATGAACTGAAAGTAGAAAAGAGAAAGTTACAAAGAGAAGTCAGAGAGACTCAAGGCCGTGTAGAAGAACTGGAAACGGCAAATTCTCATTTACAGAGGCGATTGGATAAACTTAAAAACGCAAAATCCGCTCTGTTGAAGGAGCTTTGA
Protein Sequence: MESAIAGRRRTTARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADVNRTMRVTPDSVRSSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRESEQLKRLSQTLKDELDVCHAQLIERDTLIQENGLVIVDDEGSENEDNEIENGPRPRRRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKIQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00305050;
90% Identity: iTF_00633626;
80% Identity: -