Hsal011539.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_003227715.1
- Location
- NW:84925-89623[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9e-122 1.1e-117 392.1 31.3 1 300 29 326 29 326 0.98 2 3 0.0024 28 3.3 3.2 121 171 325 375 323 378 0.92 3 3 0.043 5.2e+02 -0.9 5.0 197 238 360 400 348 401 0.55
Sequence Information
- Coding Sequence
- atggaATCAGCTATAGCTGGAAGAAGGCGGACTGCCACAAGGCATTCGGCAGAAGATCAAGCGCTCGATCAAATAGCTAAGGAGGCAGAAGCAAGGCTGGCTGCTAGGAGGCAGGCGAGAGCAGAAGCTAGAGAAATTCGAATGCGCGAATTAGAAAAACAACAGAAAGAGGCAGAAGAGAACGCTGACAGGGTTTATGATATGTGTACAGCTGACGTGAACAGAACAATGAGAGTAACTCCGGATCCAGTGCGCACATCACGCCTTCTTACAAATTCCAACAATTTCCAATCGAGTCGCCGATCTTCGGAGGATTCATTGGAAGATGCTGGATTAAGCAGAGATATTAGGCTGGAATTAAAggaatttgaagaaaaatttcGGAAGGCAATGATAGCAAATGCTCAGTTAGACAACGAAAAATCATCTTATGCCTATCAAGTTGATTTATTAAAAGACAAGTTGGAAGAGTTAGAAGAGACAACGGCACAATTACGTAGAGAATTGAGAGAAAAGAATCGAGATGTTGAACAATTAAAACGGGTCAGTCAGAGATTGAAGGAAGATTTGGATTTTTGCAGAGCACAATTGTACGATAGGGATGAACTTATAAAAGAAAACGGCTTAGTCATCGTTGAATATGTAAGTGATGATGACTATGAAAATACTGAAAATGGACCATGTCAACCTAGGAGGGTACTAGTCAGTACAGAAGCTGCAGAATTATTAGAAACGGCTGGTAAAGGTTCATTAGATGTCCGACTGAGAAAATTTGCTTCTGAGAAAAAGGAGTTGCAGGATGAAATTCGACATTTACGATTGGAATTAGAAGAGACTAGGAGTCGCGTAAGATCGGAAAGATCATCTGGCTCAGTATTAGGTTGCTTATCAGATAATGATGATATTCAGCGTGAAGCAAATAAATTGTTGGCGGATTATAAATTCAAACTACAGAAAGCAGAACAGGATATGTCTACTTTGCAAGCGACCGTAGCTAGATTGGAAAGCCAAGTAATTCGTTACAAGTCAGCCGCAGAAGCATCTGAAAAAGCGGAGGACGAATTGAAagtggaaaaaagaaagttgCAGAGAGAAGTAAGGGAAACACAAGGTCGTGTGGAAGAATTGGAAACGGCAAACTCTCATTTACAAAGGCGATTGGACAAACTTAAAAATGCAAAGTCGGCTCTTCTAAAGGAACTTTGA
- Protein Sequence
- MESAIAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELEKQQKEAEENADRVYDMCTADVNRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTAQLRRELREKNRDVEQLKRVSQRLKEDLDFCRAQLYDRDELIKENGLVIVEYVSDDDYENTENGPCQPRRVLVSTEAAELLETAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRSRVRSERSSGSVLGCLSDNDDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -