Ador006106.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000469605.1
- Location
- NW:1029608-1033846[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-115 2.8e-111 370.7 35.6 1 300 29 327 29 327 0.96 2 3 0.0035 33 2.7 3.1 122 172 327 377 326 384 0.91 3 3 0.04 3.8e+02 -0.8 5.6 194 238 358 401 339 402 0.57
Sequence Information
- Coding Sequence
- ATGGAGTCTGCTATAGCTGGACGTAGGCGGACAACCGCAAGACATTCAGCAGAAGATCAAGCTCTTGATCAGATAGCTAAAGAGGCAGAAGCTAGATTAGCTGCTAGAAGACAGGCAAGAGCAGAAGCTAGAGAAATACGAATGCGAGAATTAGAAAGACAACAGAAAGAGGCAGAGGAGAATGCAGATAGGGTATATGATATGTGTTCAgcCGATGTGAATAGAACAATGAGAGTAACTCCTGATTCTGTAAGAACGTCACGACTTCTTacgaattctaataattttcaatccagTCGTAGATCTTCCGAAGATTCACTGGAAGATGCTGGCCTAAGCAGAGATCTTAGGttagaattaaaagaatttgaagaaaaatttagaaaagcaATGATAGCTAATGCTCAATTAGACAATGAAAAATCTTCATATGCTTATCAAGTCGATctattgaaagataaattggAAGAATTGGAAGAAACAGTTGCACAACTTCGTAGAGAGCTTAGAGAAAAGAATCGGGAGTCCGAACAATTGAAAAGACTTAGTCAAACATTGAAAGATGAATTAGATGTATGCCATGCACAACTAGTAGAAAGAGATACGCTTATACAAgaaAATGGTCTAGTTATTATTGATGATGAAGGAAGTGAAAATGAAGATAATGATATAGAAAATGGCTCACGTCCTAGACGAAGAGTACTAGTCAGTACAGAAGCAGCAGAGTTATTGCAAAATGCTGGAAAAGGTTCATTagatgtCCGACTGAGAAAATTTGCttccgaaaaaaaagaattgcaagATGAGATACGACATCTAAGATTGGAATTAGAAGAAACAAGAAATCGTATTAGGTCCGAAAGATCGCCTGGTTCAGTATTAGgcTGTTTATCAGATTCTGAAGATGTGCAACGAGAAGCAAACAAGCTTTTAgcagattataaatttaaactccAAAAAGCTGAACAAGATATGTCTACTTTACAAGCTACTGTAGCCAGGCTAGAAAGCCAAGTAATACGTTATAAGTCGGCAGCAGAAGCATCTGAAAAAGCGGAAGATgaattaaaagttgaaaagagaaaattacaaagagaaGTTAGAGAGACTCAAGGACGTGTAGAAGAATTGGAAACAGCAAATTCTCATTTACAAAGGCGATTAGACAAacttaaaaatgcaaaatctgCTCTATTAAAGGAGCTTTGA
- Protein Sequence
- MESAIAGRRRTTARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADVNRTMRVTPDSVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRESEQLKRLSQTLKDELDVCHAQLVERDTLIQENGLVIIDDEGSENEDNDIENGSRPRRRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- iTF_00140585; iTF_00141823;