Cfil010797.2
Basic Information
- Insect
- Calameuta filiformis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030142265.1
- Location
- JARQSU010000606.1:115474-119556[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-115 1.5e-111 372.6 34.6 1 300 30 333 30 333 0.97 2 3 0.011 1.1e+02 2.1 2.7 122 171 333 382 332 386 0.91 3 3 0.099 9.5e+02 -1.1 5.6 194 238 364 407 352 408 0.58
Sequence Information
- Coding Sequence
- ATGGAGTCCTCTTCCGTCGCAGGGCGCAGGCGCATTGCCACTAGGCACTCTGCTGAGGATCAGGCTCTTGATCAGATCGCCAAGGAGGCAGAAGCCCGTTTGGCTGCACGGAGACAGGCCAGGGCCGAGGCCAGAGAAATCCGAATGCGAGAGCTAGAACGACAGCAGAAGGAAGCTGAGGAGAATGCCGATAGGGTTTACGATATGTGTACAGGTGAGGATCCACcCGATGTCAACCGAACCATGAGGGTAACGCCAGATCCGGTGCGAAGTTCTCGCTTATTAGTGAACACTAATAATTTCCAGTCAAGTAGACGGTCTTCCGAGGACTCTCTTGAGGATGCTGGACTCAATAGAGATCTTCGTttGGAACTTAAGGAGCTGGAGGAGAAGTTCCGAAAAGCAATGATCGCAAATGCTCAGCTGGACAATGAGAAGTCCTCCTACGCATATCAGGTTGATCTTCTCAAAGACAAGCTGGAAGAGTTGGAAGAAACAGCCGCCCAATTACGTCGTGAATTACGAGAAAAGAATCGAGAAGCCGAGCAACTCAAGAGGGTCAGTCAACGGCTCAAAGAAGATTTTGATTCTTGTAGAGCTCAGCTACTCGAACGGGACACGTTAATTGAAGAGAACGGTCTGGTCATCGTTGAGGACGAAGGTAGCGAGGACGAGGAcactgaaaatgaaaatagttcCAGGGGACCAAGGAGAAGAGTTCTAGTCAGCACGGAAGCTGCGGAATTGCTACAAAATGCAGGGGAAGGATCTTTAGACGTTCGACTTAGAAAATTCGCTTCGGAGAAGAAGGAATTACAGGATGAAATTCGGCACTTGAGACTCGAATTAGAGGAAGCTAGAAACAGGGTAAGGTCCGAAAGATCACCAGGTTCTGTTCTAGGCTGTTTATCAGACTCGGAGGATGTTCAACGAGAAGCCAACAAGCTCTTGGCTGActacaaattcaaattacaaaaagccGAGCAGGACATGTCGACATTGCAAGCGACAGTCGCGAGGCTGGAGAGTCAAGTAATACGATACAAATCGGCAGCCGAAGCCTCGGAAAAGGCTGAAGATGAGCTTAAGGTCGAAAAACGAAAGCTCCAGAGAGAAGTAAGAGAGTCCCAGGGACGCGTTGAAGAGCTGGAGACGGCAAACTCGCATTTACAGAGACGACTGGATAAATTGAAGAATGCTAAATCAGCCCTGTTGAAGGAACTCTGA
- Protein Sequence
- MESSSVAGRRRIATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTGEDPPDVNRTMRVTPDPVRSSRLLVNTNNFQSSRRSSEDSLEDAGLNRDLRLELKELEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRVSQRLKEDFDSCRAQLLERDTLIEENGLVIVEDEGSEDEDTENENSSRGPRRRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRVRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;