Obru006153.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_010583005.1
- Location
- NW:213625-219159[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-121 1.5e-117 391.6 32.1 1 300 29 327 29 327 0.99 2 3 0.0049 56 2.2 2.0 122 171 327 376 325 379 0.89 3 3 0.047 5.3e+02 -1.0 5.2 197 237 361 400 347 402 0.54
Sequence Information
- Coding Sequence
- aTGGAATCAGCTATAGCTGGAAGAAGGCGGACTGCCACGAGGCATTCGGCAGAAGATCAAGCGCTCGATCAAATAGCTAAGGAGGCAGAAGCAAGACTAGCTGCTAGGAGACAGGCAAGAGCAGAAGCTAGAGAAATTCGAATGCGTGAATTAGAAAAGCAACAGAAAGAAGCAGAAGAGAATGCTGACAGAGTTTATGATATGTGTACAGCTGATGTAAACAGAACAATGAGAGTAACCCCAGATCCAGTGCGCACATCGCGACTTCTTACAAATTCCAACAATTTCCAGTCGAGCCGTCGATCTTCAGAGGATTCATTGGAAGATGCGGGATTAAGCAGAGATATTAGGCTGGAATTGAAGGAATTTGAGGAGAAATTCCGGAAGGCGATGATAGCAAATGCTCAGTTAGACAACGAAAAATCATCTTATGCCTATCAAGTTGACTTATTAAAAGACAAGTTGGAGGAGTTAGAGGAGACAACGGCACAACTACGTAGAGAATTGAGAGAAAAGAATCGAGACGTTGAGCAATTAAAACGGGTCAGTCAGAGACTAAAAGAAGATTTAGACTTGTGCAAAGCACAATTGTACGACAGGGATGAACTTATAAAAGAGAACGGTTTAGTCATCGTTGAATACGTAAGTGAAGATGACGATTATGAAAATACTGAAAATGGACCATGTCACCCTAGGAGGGTACTAGTCAGTACGGAAGCTGCGGAATTATTAGAAACTGCTGGTAAAGGTTCGCTAGATGTCCGACTGAGAAAATTTGCTTCCGAGAAAAAAGAGTTGCAGGATGAAATACGACATTTACGATTGGAATTGGAAGAGACCAGAAGTCGTGTAAGATCGGAGAGATCATCTGGCTCAGTATTAGGTTGCTTATCAGATAACGATGATATTCAGCGTGAGGCAAATAAATTGTTGGCAGATTATAAATTTAAGCTGCAGAAAGCGGAACAGGATATGTCTACTTTGCAAGCAACAGTAGCTAGACTAGAAAGTCAAGTGATTCGTTACAAGTCAGCCGCGGAAGCATCTGAAAAGGTGGAGGACGAATTGAAAGTGGAAAAAAGGAAGTTACAGAGAGAAgTGAGAGAAACGCAAGGTCGCGTAGAAGAATTGGAGACAGCGAACTCCCATTTGCAAAGGCGATTGGACAAACTTAAAAATGCAAAGTCGGCCCTTCTAAAGGAACTTTGA
- Protein Sequence
- MESAIAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELEKQQKEAEENADRVYDMCTADVNRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTAQLRRELREKNRDVEQLKRVSQRLKEDLDLCKAQLYDRDELIKENGLVIVEYVSEDDDYENTENGPCHPRRVLVSTEAAELLETAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRSRVRSERSSGSVLGCLSDNDDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKVEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -