Npan007040.1
Basic Information
- Insect
- Nomada panzeri
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_951802685.1
- Location
- OX637832.1:17496258-17498539[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-115 1.5e-110 369.7 34.3 1 300 29 327 29 327 0.97 2 3 0.0035 90 2.7 3.1 122 172 327 377 326 384 0.91 3 3 0.039 1e+03 -0.7 5.5 194 238 358 401 339 402 0.57
Sequence Information
- Coding Sequence
- ATGGAATCTGCCATAGCCGGACGTAGGCGGACAACCGCAAGACACTCGGCAGAGGATCAGGCTCTCGATCAGATAGCCAAGGAGGCAGAAGCTAGATTAGCCGCTAGAAGGCAGGCAAGGGCGGAAGCCAGAGAGATACGAATGCGGGAGTTGGAAAGACAGCAGAAAGAGGCAGAGGAGAATGCCGATAGGGTTTACGACATGTGTTCAGCCGACGTTAATAGAACAATGAGAGTCACGCCAGATTCTGTGAGGGCGTCGCGTCTCCTCACGAACTCTAACAACTTTCAATCCAGTAGAAGATCTTCCGAAGATTCGTTAGAGGACGCTGGTTTAAACAGAGATCTCAGGTTAGAGCTGAAAGAGTTTGAGGAGAAATTTAGGAAGGCAATGATAGCCAATGCTCAGTTAGACAATGAAAAGTCTTCGTATGCTTATCAAGTTGATTTATTGAAAGACAAGTTCGAGGAATTGGAGGAAACTGTTGCACAACTTCGTAGGGAGCTCAGGGAGAAGAATCGGGAGTCTGACCAGTTGAAGAGACTCAGTCAAAGATTGAAGGACGAATTAGATGTATGCCATGCACAACTAGTTGAAAGAGATACGCTTATACAAGAAAACGGTCTAGTTATTGTTGATGACGAGGAAAGTGAAAATGAGGACAACGATGTTGAAAACGGCCCGCGTCCAAGACGAAGAGTACTAGTCGGTACAGAGGCGGCAGAATTATTGCAGACTGCCGGGAAGGGCTCGCTAGATGTCCGGCTGAGAAAGTTTGCTTCCGAAAAGAAAGAGTTGCAGGACGAGATACGACACTTGAGATTGGAATTGGAGGAGACAAGAAATCGTATAAGGTCCGAGAGATCGCCCGGTTCAGTATTAgGTTGCTTATCAGATTCAGAAGATGTGCAACGGGAAGCGAATAAACTCCTGGCCGACTACAAGTTCAAGTTGCAAAAGGCCGAACAGGATATGTCCACGTTACAGGCGACAGTGGCCAGGCTAGAGAGCCAAGTGATACGTTATAAATCGGCGGCAGAGGCGTCCGAGAAGGCGGAAGATGAATTGAAAGTCGAGAAAAGGAAATTGCAAAGAGAAGTGAGGGAGACCCAAGGCCGCGTTGAAGAATTGGAAACGGCGAATTCGCATTTACAGAGGCGACTGGACAAACTTAAAAATGCAAAATCGGCTCTGCTCAAAGAGCTTTGA
- Protein Sequence
- MESAIAGRRRTTARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADVNRTMRVTPDSVRASRLLTNSNNFQSSRRSSEDSLEDAGLNRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKFEELEETVAQLRRELREKNRESDQLKRLSQRLKDELDVCHAQLVERDTLIQENGLVIVDDEESENEDNDVENGPRPRRRVLVGTEAAELLQTAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- iTF_01066254;