Pxan010140.1
Basic Information
- Insect
- Phylloecus xanthostoma
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030142555.1
- Location
- JARQTF010000485.1:202287-206368[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-115 5.5e-111 370.6 37.0 1 300 30 329 30 329 0.96 2 3 0.0043 78 2.4 2.8 122 171 329 378 327 383 0.91 3 3 0.046 8.2e+02 -1.0 5.6 194 238 360 403 347 404 0.59
Sequence Information
- Coding Sequence
- ATGGAGTCCTCTTCCATCGCAGGGCGCAGACGCATTGCCACTAGGCACTCTGCCGAGGATCAGGCTCTCGATCAAATCGCCAAGGAGGCAGAAGCCCGTTTGGCTGCTCGGAGACAGGCCAGGGCCGAGGCCAGAGAAATTCGAATGCGAGAGTTAGAACGTCAACAAAAGGAAGCCGAGGAGAATGCGGATAGAGTTTACGATATGTGTACAGCTGATGTCAACAGAACCATGAGGGTAACGCCAGATCCGGTGCGAAGCTCTCGCTTATTAGCGAACACTAATAATTTCCAGTCAAGTAGACGGTCTTCCGAGGACTCCCTCGAGGATGCTGGACTCAATAGAGATCTTCGACTGGAACTTAAGGAGCTGGAGGAGAAGTTCAGAAAAGCAATGATCGCAAATGCTCAGCTAGACAACGAGAAGTCCTCCTACGCATATCAGGTTGATCTTCTCAAAGATAAGCTGGAAGAGTTGGAAGAAACAGCAGCTCAGTTACGTCGTGAACTACGAGAAAAGAATCGAGAAGCCGAGCAGCTGAAGAGGGTCAGTCAACGGCTCAAAGAGGATTTTGATTCTTGTAGAGTTCAGCTACTCGAACGGGACACATTAATTGAAGAGAACGGTCTGGTCATTGTTGAGGATGAAGTTAGCGAGGACGAGGACACTGAAAATGAAAGTAGTACCAGGGGACCCAGAAGAAGAGTTCTAGTCAGCACCGAAGCTGCGGAATTGCTGCAAAATGCAGGGGAAGGATCTTTAGACGTTCGACTTAGAAAATTCGCTTCGGAGAAGAAGGAATTACAGGATGAAATTCGGCACTTGAGACTCGAACTGGATGAAGCTAGAAACAGGGTAAGGTCCGAAAGATCACCAGGTTCTGTTCTAGGCTGTTTATCAGATTCCGAGGATGTTCAGCGAGAAGCCAACAAGCTCTTGGCTGActacaaattcaaattacaaaaagccGAGCAGGATATGTCGACATTGCAAGCGACGGTCGCGAGGCTGGAGAGTCAAGTAATAAGATACAAATCAGCAGCCGAAGCCTCGGAAAAGGCTGAAGATGAGCTTAAGGTTGAAAAACGAAAACTTCAGAGAGAAGTAAGAGAGTCCCAGGGACGCGTTGAAGAGCTGGAGACGGCAAACTCGCATTTACAGAGACGTTTGGATAAATTGAAGAACGCAAAATCAGCCCTGTTGAAGGAGCTCTGA
- Protein Sequence
- MESSSIAGRRRIATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADVNRTMRVTPDPVRSSRLLANTNNFQSSRRSSEDSLEDAGLNRDLRLELKELEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRVSQRLKEDFDSCRVQLLERDTLIEENGLVIVEDEVSEDEDTENESSTRGPRRRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELDEARNRVRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- iTF_00770370;