Aplu079302.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_951804975.1
- Location
- OX638111.1:35314837-35317117[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-114 1.4e-109 368.8 36.1 1 300 29 327 29 327 0.97 2 3 0.0037 4.5e+02 2.6 3.7 122 172 327 377 325 385 0.91 3 3 0.054 6.5e+03 -1.2 5.8 194 238 358 401 345 402 0.57
Sequence Information
- Coding Sequence
- ATGGAATCTGCTATAGCTGGACGTAGGCGGACAACCGCACGACATTCAGCAGAGGATCAGGCTCTCGATCAGATAGCCAAGGAGGCAGAAGCTAGATTAGCTGCTAGAAGACAGGCAAGGGCAGAAGCACGAGAAATACGAATGCGGGAGTTAGAAAGGCAACAGAAAGAGGCAGAGGAGAATGCGGATAGGGTTTATGACATGTGTGCAgcCGATGTGAATAGACAAATGAGAGTAACTCCTGATTCTGTGAGGACGTCACGCCTCCTCACAAATTCTAACAACTTTCAATCCAGTCGTCGGTCTTCCGAAGATTCTTTGGAAGATGCTGGCCTAAGCAGAGATCTCAGGTTAGAGCTGAAAGAATTCGAAGAGAAATTTAGGAAGGCAATGATAGCTAATGCTCAGTTAGACAATGAGAAGTCTTCGTATGCTTATCAAGTTGATTTGTTAAAAGACAAATTAGAGGAACTGGAGGAAACGGTTGCACAATTACGTAGAGAACTTAGGGAGAAGAATCGGGAGTCCGAGCAATTAAAGAGAATCAGTCAAAGATTGAAAGACGAGTCAGATGTATGCCATGCACAACTATTAGAAAGAGATACGCTTATACAGGAAAATGGTTTAGTTATTATTGAAGATGAAGGAAGTGAAAACGAGGATAACGAGATTGAAAATGGCCCACGTCCAAGACGAAGAGTACTAGTCAGTACAGAAGCAGCGGAACTACTGCAAAATGCTGGAAAGGGTTCGTTGGATGTTCGGCTGAGAAAATTTGcttctgaaaaaaaagaactgcaaGACGAGATACGACATCTAAGATTGGAGCTAGAGGAGACGAGAAATCGTATTAGGTCCGAAAGATCGCCTGGTTCAGTATTAGGTTGTTTATCAGACTCCGAAGATGTGCAACGAGAAGCAAACAAACTTTTAGCCGACTATAAGTTCAAACTACAAAAAGCTGAACAGGACATGTCCACTTTGCAAGCCACAGTAGCCAGGCTAGAGAGCCAAGTGATACGATATAAGTCAGCAGCGGAGGCTTCTGAGAAAGCAGAAGACGAATTAAAagtggaaaagagaaaattacAAAGAGAAGTTAGGGAGACACAGGGCCGCGTCGAAGAACTGGAGACGGCGAATTCTCATTTGCAGAGGCGACTGGACAAACTTAAAAATGCAAAATCCGCTCTGTTGAAGGAGCTTTGA
- Protein Sequence
- MESAIAGRRRTTARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCAADVNRQMRVTPDSVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRESEQLKRISQRLKDESDVCHAQLLERDTLIQENGLVIIEDEGSENEDNEIENGPRPRRRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSERSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -