Pper020882.1
Basic Information
- Insect
- Priocnemis perturbator
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963942575.1
- Location
- OZ012656.1:3717286-3719819[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.7e-117 1.4e-112 376.3 31.1 1 300 29 327 29 327 0.95 2 3 0.0046 1.1e+02 2.3 2.9 122 171 327 376 325 381 0.91 3 3 0.042 1e+03 -0.8 5.5 194 238 358 401 339 402 0.58
Sequence Information
- Coding Sequence
- ATGGAGTCTGCCGTAGCTGGACGAAGGCGGACTGCTACTCGGCATTCAGCCGAGGATCAGGCTCTCGACCAAATAGCCAAAGAGGCAGAAGCGAGGTTGGCCGCTAGAAGGCAGGCAAGGGCAGAGGCAAGAGAAATCCGAATGAGAGAATTGGAGAGGCAACAAAAGGAAGCAGAAGAGAATGCTGACAGGGTTTATGATATGTGCACAGATACTCCTAGAACAATGAGGGTCACGCCAGATCCAGTACGCACATCACGTCTTTTGACAAACTCAAACAACTTTCAGTCAAGTCGTAGATCATCTGAAGATTCATTAGAAGATGCTGGACTCAGTAGAGATCTAAGGCTGGAGTTGAAGGAGTTTGAGGAGAAATTTCGAAAGGCAATGATAGCTAATGCTCAATTAGACAATGAAAAGTCGTCGTACGCCTATCAGGTGGACTTATTGAAAGACAaattagaggaattggaggaaaCGGCCGCACAATTACGTAGAGAACTCAGAGAGAAGAATCGCGATGCCGAGCAGTTGAAACGAATTAGTCAGAGACTGAAGGAGGACTTAGACTTGTGTAAAACGCAACTGCTTGAAAGAGATACACTAATACAGGAAAATGGCTTAGTTATTGTTGAGGACGAGGAGAGCGGGGACGAGGAGAACGACATTGAGAATGGACCGTGTCGTAGGAAGAGAGTACTAGTCAGTACGGAGGCTGCTGAATTATTGCAGAACGCTGGAAAGGGTTCATTAGATGTTCGGCTGAGGAAATTTGCATCTGAGAAGAAGGAGCTACAGGACGAAATTCGTCACTTGAGATTGGAATTGGAGGAGACAAGAAACCGCATGAGACCGGAGAGGTCTCCGGGTGGTTCGGTACTGGGCTGTTTCACCGACTCCGAGGACATTCAGCGCGAGGCTAACAAGCTCCTGGCCGATTACAAGTTTAAATTGCAAAAAGCGGAGCAAGACATGTCCACTTTACAAGCCACTGTTGCCAGATTGGAGAGTCAGGTTATTCGTTACAAATCAGCAGCGGAGGCGTCCGAGAAGGCGGAGGATGAGTTGAAGGTTGAAAAGCGAAAGCTCCAACGAGAAGTCAGAGAATCACAGGGTCGCGTTGAGGAATTGGAAACGGCGAATTCGCATTTGCAAAGGCGACTGGACAAGCTTAAAAACGCGAGGTCGGCACTTCTGAAGGAACTTTGA
- Protein Sequence
- MESAVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTDTPRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNRDAEQLKRISQRLKEDLDLCKTQLLERDTLIQENGLVIVEDEESGDEENDIENGPCRRKRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRMRPERSPGGSVLGCFTDSEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNARSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -