Cpra008658.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000197.1:4121122-4126375[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-116 2.8e-112 375.4 32.4 1 300 29 327 29 327 0.95 2 3 0.0055 1.4e+02 2.1 2.4 122 171 327 376 326 379 0.90 3 3 0.037 9.3e+02 -0.7 5.2 194 238 358 401 344 402 0.57
Sequence Information
- Coding Sequence
- ATGGAGTCTGCCGTAGCTGGACGAAGGCGGACTGCTACTCGGCATTCAGCCGAGGATCAGGCTCTCGACCAAATAGCCAAAGAGGCAGAAGCAAGGTTGGCCGCTAGAAGGCAGGCAAGGGCAGAAGCTAGAGAAATCCGAATGAGAGAATTGGAAAGGCAGCAGAAGGAAGCAGAAGAGAATGCTGACAGGGTTTATGATATGTGCACAGACACTACTAGAACAATGAGAGTAACGCCAGATCCAGTACGGACATCGCGTCTGCTGACGAATTCAAACAACTTCCAATCGAGTCGTAGATCATCAGAGGATTCATTAGAAGATGCTGGCCTCAGTAGAGATCTCAGGTTGGAGTTGAAAGAATTCGAGGAGAAATTTCGGAAGGCGATGATAGCTAACGCTCAATTAGACAATGAAAAATCGTCGTACGCCTACCAGGTGGACTTACTGAAGGACAAGCTAGAGGAATTGGAGGAAACGGCTGCACAATTGCGCAGGGAACTTAGAGAGAAGAACCGCGACGCCGAGCAATTAAAGCGAATTAGTCAGAGACTGAAGGAGGACCTAGATTTATGTAAAACGCAACTGCTGGAAAGAGATACGCTCATACAGGAGAATGGCTTAGTTATTGTTGAGGACGAGGAGAGCGGGGACGAGGAGAACGACATCGAGAATGGACCGTGTCGTAGGAAAAGAGTACTAGTCAGTACGGAAGCTGCCGAATTACTGCAAAACGCCGGAAAGGGTTCATTAGACGTTCGGCTGAGAAAATTTGCGTCCGAGAAGAAAGAGCTGCAGGATGAAATCCGTCACTTGAGATTGGAATTGGAGGAGACAAGAAATCGCATGAGACCGGAAAGGTCCCCCGGCGGTTCGGTATTAGGTTGTTTCACCGACTCCGAGGATATTCAGCGCGAGGCTAATAAGCTGTTGGCCGATTACAAGTTTAAGTTACAAAAGGCGGAACAGGATATGTCTACTTTGCAAGCGACCGTGGCCAGACTGGAGAGTCAGGTTATTCGTTACAGATCGGCGGCAGAGGCGTCTGAAAAGGCGGAGGACGAATTGAAAGTTGAAAAACGAAAGCTCCAACGAGAAGTCAGAGAATCGCAGGGTCGTGTCGAGGAATTGGAAACGGCGAATTCTCACCTGCAGAGGCGACTGGACAAACTGAAAAACGCGAGATCGGCGCTGCTGAAGGAACTTTGA
- Protein Sequence
- MESAVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTDTTRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNRDAEQLKRISQRLKEDLDLCKTQLLERDTLIQENGLVIVEDEESGDEENDIENGPCRRKRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRMRPERSPGGSVLGCFTDSEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYRSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNARSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00633626;
- 80% Identity
- -