Dkik014284.1
Basic Information
- Insect
- Drosophila kikkawai
- Gene Symbol
- retn
- Assembly
- GCA_018152535.1
- Location
- NW:4156005-4179443[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-26 7.1e-23 80.5 0.0 2 89 297 382 296 382 0.96 2 2 3.3 8e+03 -3.0 0.4 12 12 546 546 519 583 0.53
Sequence Information
- Coding Sequence
- ATGCAACTGCGTGTGCACCCTAATATGGACTGTCGTTCAACCAGCAATATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCTGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCTATAGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGCAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTAAGccatcatcatcaactGCCGCCGAATCATCCGCTGAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTAGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGattatgcagcagcagctcatgCTGCGGCCTTTGGAGCCAACATGCTGCCCACCACCATCAACTCGGGCTTTCCGCTGCCCCACAATTCGGTGgctgctgcagcggcagctgccTCCTTTGGCCATGTGACCTCGGCTCCAAGTGGTGGCAATAGCTACAATAACGGTGGCACCACCACAACAGCCAGCTCTAATAGTAATCCCAGCAGcaatggaggaggagcaggaacagctggaggaggaggagcagccacAGGAACCGGCGGCAGTGGCAATGCAAGCGGAGGAGGACACCCCTTCTCTTTTGCATCCCCAACAGCAGCGCCCAGTGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCGAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGAcgatttgttttcatttatgcAAAAGCGCGGTACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTATGAACTGTACAATCTAGTGATAGCCCGCGGTGGTCTGGTGGATGTTATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAATCTGAGCACGCCGGCAGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCGCTTCCGGGTGGCATGCAGCAAATGTCGCCCCTGGCCCTGGTTACCCATGCCGCGGTGGCCAACAATCAGCAGGCtcaggctgctgctgccgccgccgctgctcaTCACCGATTGATGGGTGCCCCGGCCTTTGGCCAAATGCCCAACCTGGTCAAGCAGGAGATCGAAAGCCGTATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTGGGTGCTAGCCTGCCCcatcagcagcaccagcagcagcaggcacagcaccagcaacagcagcaacaatcgcagcagcagtcgcagcaacagcagcagcaacatcacctgcagcagcaacagcagcagcagcgtcagcGCTCACAGAGCCCGGATCTGAGCAAGCATGAGGCGCTTAGCGCCCAGGTGGCCCTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCCCCGCAGCAACGCGAAGCTTTGAACCTCTCCGACTCACCGCCGAATCTCACGAATATCAAAAGGGAACGCGAACGGGAGCCGACGCCCGAGCCCGTGGAGCAGGACGACCTATCCGCTGGCCATCAACCACCGCCGGCCAAGCGCCTGGGCAGCGGCCTCCTGCCACCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCCgcagtggcggcggcagcgggcTTCCACCATCAacaggcagcagcggcggcggccggtcatcatcaccagcagcaacaggatgCCGCCTCCGAGGGTGAGCCGGAGGACGAGTATGGCCATGGAGAGCACAATACCACCGGCAACTCGTCCTCGCTACACGACGACAGCGAGACAGCTCAGCCCATGAATGGTCATGGacaccaccatcatcatcatcatcaccagagCCATCAGCTGGATAAATCAGATGATTCGGCCATTGAGAACTCGCCCAGCACTTCCACCACCACTGCCTCGGTGGGTCATCGTCACAGCTCGCCAGTGTCCACCAAGAAGAAGAGCGGCTGTGGGTCAAAGCCACAGGATAAGGATCTAGCTGGGGATAGCAAAAGCTCTAACAGCAAGCTGAATCCTTTGGAAACGTTGAGCCTGCTCTCCGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCAGTGAGAATGGAGAACAGCAGCTAATGGTCAATCTAGAGCTGAATGGCGTCAAGTACTCGGGTGTTCTGGTGGCCAATGTGGCTCACTCCAACCAGAGCATGACTAGGAACAGCTCGCCCTGCCACGAGGCTGCAGAACCCCTAAaccaggaggaggaagaggagcacGACGAAGAGGAAGAAGAGGAGCTGCGGAAAGTCGCTGAAGAGGAGGACGAAGCTCATCGATCGCCCATTAAGCAGGAGGCAGACAATGAACATGGCGATGACCAGGATATGGAGTCAACAGCGGCGGCTATAATAAatggaggcggaggaggaggaggaggcaatGGCTCGGCTGTGGGTGGACCAGTGGCCATGCCCCTGGTCAGCTAG
- Protein Sequence
- MQLRVHPNMDCRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNSYNNGGTTTTASSNSNPSSNGGGAGTAGGGGAATGTGGSGNASGGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQQAQHQQQQQQSQQQSQQQQQQHHLQQQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDLSAGHQPPPAKRLGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAAAAGHHHQQQQDAASEGEPEDEYGHGEHNTTGNSSSLHDDSETAQPMNGHGHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGCGSKPQDKDLAGDSKSSNSKLNPLETLSLLSGMQFQVARNGTSENGEQQLMVNLELNGVKYSGVLVANVAHSNQSMTRNSSPCHEAAEPLNQEEEEEHDEEEEEELRKVAEEEDEAHRSPIKQEADNEHGDDQDMESTAAAIINGGGGGGGGNGSAVGGPVAMPLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00489161; iTF_00532891; iTF_00593633; iTF_00505186; iTF_00581314; iTF_00536548; iTF_00547847; iTF_00605357; iTF_00602367; iTF_00489865; iTF_00477802; iTF_00525674; iTF_00540874; iTF_00524203; iTF_00604619; iTF_00602368; iTF_00617419; iTF_00488497; iTF_00539444; iTF_00479957; iTF_00606101; iTF_00612597; iTF_00596440; iTF_00592176; iTF_00594329; iTF_00591486; iTF_00618938;
- 90% Identity
- iTF_00612597;
- 80% Identity
- -