Basic Information

Insect: Drosophila eugracilis
Gene Symbol: retn
Assembly: GCA_018153835.1
Location: NW:1634358-1657010[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.7e-26 6.4e-23 80.6 0.0 2 89 295 380 294 380 0.96

2 2 2.9 6.8e+03 -2.8 0.2 13 25 537 549 514 576 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.7e-26	6.4e-23	80.6	0.0	2	89	295	380	294	380	0.96
2	2	2.9	6.8e+03	-2.8	0.2	13	25	537	549	514	576	0.52

Sequence Information

Coding Sequence: ATGCAACTTCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAAACAGCAATATTGAACGCGATTCCGATCTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAGATGCGCGACTGCGACTCCGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCCCGCTTAAGTCACACAGTTTCCGGCGGAGGAGGGAACTTCGCTAGTCCCGAGCCACAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCGAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTCCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGATTACGCGGCCGCAGCTCATGCCGCTGCTTTCGGGGCCAATATGCTGCCCACGACGATCAACTCTGGATTCCCGCTGCCCCACAATTCGGTGgctgcggcggcggcagctgccTCTTTCGGTCACGTGACCTCCGCACCGAGTGGCGGCAATGGGGGTAGCTACAACGGAGGCACCAACACCACGCCCAGCTCCAACAGTAACGCGGCCAGCAATGGAGGCGGCAACAGCGGACCAGGCGGTACCGGAGGATCAggtggcggaggaggaggtggaggagtaGGAGTGGGTGGCCACCAgttctcgtttgcatccccCACATCAGCGCCGAGCGGCAAAGAAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCTTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGACGACCCCAAGCGCAAAGAGTTCCTGGACGACTTGTTCTCGTTTATGCAAAAGCGCGGTACGCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGACCTCTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGGCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGACGGCAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGCGACCCTCTCTGCCGGGTGGCATGCAACAAATGTCGCCTCTGGCTTTGGTCACACATGCCGCGGTGGCCAATAATCAACAGGCTCaggctgctgccgccgccgccgcagctCATCATCGCCTGATGGGAGCTCCCGGCTTTGGCCAGATGCCCAACTTGGTCAAGCAAGAGCTCGAGAGCCGTATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGCATGCCGCCTGTTCTGGGCGCCAGTCATccccaccagcagcagcactcacaacagcagcaactccagcagcagcaacatcagcagcagcagcagtcgcagcagcaacaccacctGCAGCAGCAACGCCAGCGCTCCCAGAGTCCGGACCTGAGCAAGCACGAGGCACTGAGCGCTCAGGTGGCTCTATGGCACATgtaccacaacaacaacagcccaCCGGGATCGGCACACACCTCGCCGCAGCAACGCGAGGCCCTGAACCTGTCCGACTCGCCGCCAAATCTGGCAAATATAAAAAGGGAACGCGAACGTGAACCTACGCCGGAGCCCGTGGACCAAGACGACCAGCCCCACCAGCCGCCCCCAGCCAAGCGCGTGGGCAGTGGCCTCCTACCACCAGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCCGCTGTAGCAGCGGCCGCCGGATTCCATCATCCTTCCATGAACCACCAGCAGGATGCCGCCTCCGAGGGCGAACCTGAGGACGATTACGGCCATGCCGAGCACAATACCACGGGCAACTCTTCGTCGATGCACGATGAACATGAGCCACAGCAGATGAAcggccaccaccaccagaacCACCAGCTGGACAAGTCCGACGACTCGGCCATTGAGAACTCTCCCACAACATCGACCACCACCGGTGGCTCGGTGGGCCATCGCCACAGTTCGCCCGTTTCCACCAAGAAGAAGGGCGGTGGCAAGCCCCAGAGCAGCGGAAAGGATCTGCCAGCCGAGGACAAGGATGCGTCCACTGGCAAGCTCAACCCCCTCGAGACGCTGAGCCTGCTGTCCGGCATGCAGTTTCAAGTGGCAAGAAATGGAACTGGCGACAACGGCGAACCACAGCTGATTGTCAATCTGGAGCTTAATGGCATCAAGTACTCGGGAGTGCTGGTGGCCAATGTGCCGCTGTCCCAGGGCGAAACAAGGACGAGCTCACCCTGCCACGCTGAAGCACCCGTAACCGAGGAAGAGCACGACGGCGAGGAGCCGAAAGCTGGTGAAGAGGAATCGGAATCACATAGATCGCCAGTTAAGCAGGAGAACGTGGAAGCCGATGACCAGGACATGGAGGCCAACGAGGTCCTTGTGAATGGAGGTGGTGCTGCAGGCGTGGGTGTCCCCCTGCTAAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNGGSYNGGTNTTPSSNSNAASNGGGNSGPGGTGGSGGGGGGGGVGVGGHQFSFASPTSAPSGKEANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQELESRMMEYLQLIQAKKEQGMPPVLGASHPHQQQHSQQQQLQQQQHQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLANIKREREREPTPEPVDQDDQPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMNHQQDAASEGEPEDDYGHAEHNTTGNSSSMHDEHEPQQMNGHHHQNHQLDKSDDSAIENSPTTSTTTGGSVGHRHSSPVSTKKKGGGKPQSSGKDLPAEDKDASTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGIKYSGVLVANVPLSQGETRTSSPCHAEAPVTEEEHDGEEPKAGEEESESHRSPVKQENVEADDQDMEANEVLVNGGGAAGVGVPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00581314; iTF_00536548; iTF_00578309; iTF_00547847; iTF_00604619; iTF_00592176; iTF_00539444; iTF_00596440; iTF_00618938; iTF_00591486; iTF_00602367; iTF_00602368;
80% Identity: -