Dser003986.1
Basic Information
- Insect
- Drosophila serrata
- Gene Symbol
- retn
- Assembly
- GCA_002093755.1
- Location
- NW:9560-33775[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-26 7.1e-23 80.5 0.0 2 89 292 377 291 377 0.96 2 2 3.2 7.5e+03 -2.9 1.0 79 79 539 539 509 581 0.57
Sequence Information
- Coding Sequence
- ATGCAACTGCGTGTGCACCCTACTATGGACTGTCGTTCAACCAGCAATATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCTGTGGATGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCTATTGCGGCTCGTCTAAGTCACACAGTTtccggcggaggaggaggaggaggtaaCTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTGAGccatcatcatcaactGCCGCCGAATCATCCGCTTAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAGTCTGCAGCACAGCGATGTTCTGGAGAAGCTCAAGATGCAGGTGCGAGACATGAAGGTGGGACTGATGGAGCAGGATTATGCGGCAGCAGCCCATGCAGCGGCCTTTGGAGCCAATATGCTGCCCACCACCATTAATTCGGGCTTCCCGCTGCCCCACAATTCGGTggctgcagcagcggcagccgcCTCCTTTGGCCACGTGACCTCGGCTCCAAGTGGTGGCAGCAACTACAACGGTGGCACCACCACAACACCCAGCTCCAATAGTAATCCCAGCAGTAAtgggggaggaggagcaggcaCAGCTGGAGGAGGGGGAGGAGGAACAAGCTCTGGAGGCAACAGTGGAGGCGGACATCCCTTCTCCTTCGCATCCCCAACAGCAGCGCCCAGCGGCAAAGAAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGAcgatttgttttcatttatgCAAAAGCGCGGCACACCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAACTATACAATCTGGTGATAGCCCGCGGCGGTCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACACCGGCGGAGCTGCAGGCGGCCATCGATGGCAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACCCCCATTTCGCGACCCTCTCTACCGGGTGGCATGCAACAAATGTCCCCTCTGGCTTTGGTCACACATGCCGCGGTGGCCAACAATCAGCAGGCTCAGGCTGcggctgccgccgccgctgcccaTCACCGATTGATGGGAGCCCCGGCCTTTGGCCAGATGCCCAATCTGGTCAAACAGGAGATCGAAAGCCGTATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTGGGTGCTAGCCTGCCccatcagcagcatcagcagcagcagcagcagcaggctcagcagcagcaacaccagcagcagcaatcacagtcgcagcagcaacagcagcagcagcagcatcacctgcagcagcaacagcagcagcgtcaGCGTTCGCAGAGTCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCTCTGTGGCACATGtatcacaacaacaacagtccACCGGGTTCCGCACACACCTCCCCCCAGCAACGCGAAGCTCTGAACCTCTCCGACTCACCGCCGAATCTCACGAACATCAAAAGGGAACGCGAACGGGAGCCGACGCCAGAGCCTGTGGAGCAGGATGACCTCTCCACCGGCCACCAGCCACCGCCGGCCAAGCGCATGGGCAGCGGCCTCCTGCCACCCGGCTTCCCTGCCATTTACCTGAATCCCCACAACATGGCCGCAGTGGCTGCAGCGGCAGGATTCCATCATCAGCAGGCAGCAGCGGTGGCGGCcggccatcatcatcaacagcagcagcagcaccaggaTGCCGCCTCCGAGGGCGAGCCGGAGGATGAGTACGGCCATGGGGAGCACAATACCACCGGCAATTCGTCCTCGCTGCACGATGACAGCGAGACAGCGCAGCCAATAAATGgacaccaccatcaccaccatcatcatcatcaccaccagAGCCATCAGCTGGACAAATCCGATGATTCCGCCATTGAGAACTCGCCCAGCACATCCACCACCACCGCTTCGGTGGGTCATCGCCACAGTTCGCCAGTGTCCACCAAGAAGAAGGGCGGCTGCGGATCCAAGCCACAGGATAAGGATTTAGGTGGCGGGGATAAGAGCTTGGCCAGTGGCAAGCTGAATCCTTTGGAAACGCTGAGCCTGCTCTCCGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCGGTGAGAATGGTGAACAGCAGCTAATGGTCAATTTGGAGCTGAATGGCGTCAAGTACTCGGGTGTCCTGGTGGCCAATGTGGCTCACTCTAACCAGAGTGTGACAAGGACCAGCTCACCTTGTCACGAGGCTGAAGTCCACCTCAAccaagaggaggaggaggagcaggagcacgATGATGAggaagagcaggagcagaggaAAGCCGCTGAAGAGGAAGATGAAGCCCATCGATCCCCTATTAAGCAGGAGGTAGAGAACGAGCATGACGATGACCAGGATATGGAGTCCACAGCGGCGGCCATTGTGaatggaggaggagcaggtggaGCCAACAATTCGACAGTGGGTGGTGCTGGCGTGGCAATGCCCCTGCTCAAGGACGCGGTGGTCAGCTAG
- Protein Sequence
- MQLRVHPTMDCRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPSLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGSNYNGGTTTTPSSNSNPSSNGGGGAGTAGGGGGGTSSGGNSGGGHPFSFASPTAAPSGKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQQQQQAQQQQHQQQQSQSQQQQQQQQHHLQQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDLSTGHQPPPAKRMGSGLLPPGFPAIYLNPHNMAAVAAAAGFHHQQAAAVAAGHHHQQQQQHQDAASEGEPEDEYGHGEHNTTGNSSSLHDDSETAQPINGHHHHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKGGCGSKPQDKDLGGGDKSLASGKLNPLETLSLLSGMQFQVARNGTGENGEQQLMVNLELNGVKYSGVLVANVAHSNQSVTRTSSPCHEAEVHLNQEEEEEQEHDDEEEQEQRKAAEEEDEAHRSPIKQEVENEHDDDQDMESTAAAIVNGGGAGGANNSTVGGAGVAMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527091;
- 90% Identity
- iTF_00612597;
- 80% Identity
- -