Dmim014005.2
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- retn
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000014.1:30135335-30148407[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-26 9.7e-23 80.5 0.0 2 89 316 401 315 401 0.96 2 2 3.4 9.8e+03 -2.8 0.4 14 14 561 561 532 600 0.55
Sequence Information
- Coding Sequence
- ATGGAGTTGCTCTGCAGAGTTGGCGAGCTCAAGTCGCAGTTGGTGACTTCAACACTCTCGGCCATGCGTGGCGGACTTCTTGGCAAAGAGTCACGGCTGGCAGAGGTCGCTTGGCCGGCCAGGAGCGGAGTTGGAtCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCCCGCTTAAGTCACACAGTTTCCGGCGGCGGAGGGAACTTCGCCAGTCCCGAGCCACAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCCAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGTCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGATTACGCGGCTGCTGCTCATGCCGCGGCTTTCGGGGCCAACATGCTGCCCACGACCATCAGCTCGGGATTCCCGCTGCCCCACAACTCGgtggctgcggcggcggcagcggcctCCTTTGGCCACGTGACCTCGGCGCCCAGTGGTGGTGGCACTGGGGGCAGCTACAATGgaggcaccaccaccacccctaGCTCCAACCAGGCCACCACCAATGGgggtggcggcggcagcagcagtggaCCCGGAGGAACCGGAGGatctggcggcggcggcggaggaggagctggtggCCACCAGTTCTCGTTTGCATCACCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCGTCCAACTCGTCGACGTCCAGCGAGGCCTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGATGACCCCAAACGCAAAGAGTTCCTGGACGATTTGTTCTCATTCATGCAAAAGCGCGGTACGCCGATCAATCGGCTGCCGATTATGGCCAAATCGGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGCCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCAATGACGCCCATTTCGCGACCTTCTCTCCCAGGTGGCATGCAGCAAATGTCGCCTCTGGCTTTGGTCACCCATGCCGCCGTGGCCAACAATCAACAGGCTCaggctgccgccgccgctgcagcaGCCCATCATCGCCTGATGGGAGCTCCGGCCTTTGGCCAGATGCCCAACTTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGCATGCCGCCCGTGCTGGGTGGCAATCAtccccaccagcagcagcaacagcacccacagcagcagcagcagcatcagcaacatcagcagcagtcgcaacagcagcagcaacatcacctgcagcagcagcagcagcgccagcgaTCGCAGAGCCCGGACTTGAGCAAGCACGAGGCACTCAGCGCTCAGGTGGCTCTGTGGCACATGtatcacaacaacaacagcccgCCGGGATCGGCACACACCTCGCCGCAGCAACGCGAAGCCCTGAACCTGTCCGATTCTCCGCCAAATCTCACAAACATCAAGCGGGAACGCGAAAGGGAACCCACGCCGGAGCCCGTGGACCAGGACGACCATCCCCACCAGCCGCCTCCAGCCAAGCGCGTGGGCAGTGGCCTCCTGCCACCTGGCTTCCCCGCCAACTTCTACCTGAATCCCCACAACATGGCCGCtgtggcggcggcagcgggaTTCCATCACCCATCCATgggccaccagcagcaggatgCCGCCTCCGAGGGCGAGCCGGAGGACGATTACGCCCATGGCGAGCACAATACCACGGGCAACTCCTCGTCCATGCACGATGACAGCGAGCCGCAGCAGATGAAcggccatcatcatcatcatcaccaccagAGCCACCAGCTGGACAAGTCCGATGACTCGGCCATTGAGAACTCCCCGACAAcctcctccaccaccaccactggcGGTGGGTCGGTGGGTCATCGCCACAGTTCACCCGTCTCCACCAAGAAGAAGGGCGGCGTTAAGCCCCAGAGCGGAGGAAAGGATCTGCCGGCCGAGGACAAGGTGGCCGTCTCCACTGGCAAGCTCAATCCCCTCGAGACGCTGAGCCTGCTGTCCGGCATGCAGTTTCAAGTGGCAAGGAATGGAACTGGCGATAACGGCGAACCGCAGCTAATTGTCAATCTGGAGCTCAATGGCGTCAAGTACTCCGGCGTGCTGGTGGCCAATGTGCCGCTGTCCCAGGGCGAAACCAGGACGAGCTCCCCCTGCCACCCGGCAGAAGCAGCCGCCCacgcggaggaggaggaagagcacgacgaggaggagccaCCGAAAGCCACGGAGGAGGATTCGGAATCCCATCGATCGCCCGTTAAGCAGGAGAACGAGGATGCCGACCAGGATATGGAGGCCAGCGAGGTCCTTGTGAACGGAGGTGTTTTagaagggggtggtggtgctgctgctgtgcctgTGCCCCTGCTCAAGGACGCCGTGGTCAGCTAG
- Protein Sequence
- MELLCRVGELKSQLVTSTLSAMRGGLLGKESRLAEVAWPARSGVGSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSGGGTGGSYNGGTTTTPSSNQATTNGGGGGSSSGPGGTGGSGGGGGGGAGGHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHPHQQQQQHPQQQQQHQQHQQQSQQQQQHHLQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDHPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQQDAASEGEPEDDYAHGEHNTTGNSSSMHDDSEPQQMNGHHHHHHHQSHQLDKSDDSAIENSPTTSSTTTTGGGSVGHRHSSPVSTKKKGGVKPQSGGKDLPAEDKVAVSTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQGETRTSSPCHPAEAAAHAEEEEEHDEEEPPKATEEDSESHRSPVKQENEDADQDMEASEVLVNGGVLEGGGGAAAVPVPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527091;
- 90% Identity
- iTF_00505186;
- 80% Identity
- -