Dmay009905.1
Basic Information
- Insect
- Drosophila mayri
- Gene Symbol
- retn_1
- Assembly
- GCA_008042485.1
- Location
- VNJN01008739.1:133198-155526[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-26 6.8e-23 80.7 0.0 2 89 290 375 289 375 0.96
Sequence Information
- Coding Sequence
- ATGCAACTGCGTGTGCATCCGACTATGGACTGTCGTTCAACCAGTAATATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCCGTGGATGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCTATTGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGCAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTGAGccatcatcatcaactGCCGCCGAATCATCCGCTGAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAACCTGCAGCACAGCGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGATTATGCAGCAGCTGCCCATGCAGCGGCCTTTGGGGCCAACATGCTGCCCACCACCATTAACTCGGGCTTCCCGCTGCCCCACAATTCGGTggctgcagcggcggcagctgccTCCTTTGGCCACGTGACCTCGGCTCCAAGTGGTGGCAACAACTACAACGGTGCCACTACCACAACACCCAGTTCTAATAGTAATCCCAGCAGTAATGGTGGCGGAGCTGCCACAGGTGGAGGCGGTACAGGATCAGGCAGTGCTGGTGGAGGAGGACACCCCTTCTCATTCGCATCCCCGACAGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCTTCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGGCACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAACTGTACAATCTGGTGATAGCCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTAAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGCAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCTCTACCGGGTGGCATGCAACAAATGTCCCCTCTGGCCCTGGTCACCCATGCCGCTGTGGCCAACAATCAGCAGGCTcaggctgctgccgccgccgctgctgcccaTCACCGACTGATGGGTGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAATATTTGCAtccGCCGGGATCCGCACACACCTCCCCCCAGCAACGCGAAGCTCTGAACCTTTCCGACTCGCCGCCAAATTCAAATCTCACAAACATCAACATCAAAAGGGAACGCGAGCAGGACAAGGAGCCCGTGGAGCAGGATGACATTGAGCATGACCTCTCCACCGGCCACCAGCCGCCGCCGGCCAAGCGCATGGGCAGCGGCCTCCTGCCGCCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCCGCTgtggcagcagcggctggCTTCCACCATCAacaggcggcagcggcggcggccggtcatcatcatcaccagcagcagcaggatgcCGCCTCCGAGGGCGAGCCGGAGGACGACTACGGCCACGGGGAGCACAACACCACCGGCAACTCGTCCTCGCTGCACGACGACAGCGAGACAGCGCAGCCCATGAAcggccatcatcatcatcaccaccaccagagCCATCAGCTGGACAAATCGGATGATTCGGCCATTGAGAACTCGCCCAGCACatccaccaccaccgcctcGGTGGGTCATCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAGAGCGGCTGTGGGTCCAAGCCACAGGACAAGGATCTGGCTGGCGGGGATAAGGGCGTATCCAGTGGCAAGCTGAATCCCTTGGAAACGCTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCGGCGAGAATGGTGAGCCGCAGCTAATGGTTAACCTGGAGCTGAACGGCGTCAAGTATTCGGGAGTCCTGGTGGCCAATGTGGCTCACTCCAAGCAGAGCGTCACAAGGAACAGCTCCCCCTGCCACGAGGCTGAAGCTCTGCCAAatgaggaagaggaggagcacGACGatgaggaagaggaggagcaaAGGAAAGCTGCTGACGAGGAGGACGAAGCCCATCGATCGCCCATCAAGACAGAGAACGAGCATGACGAGGACCAGGACATGGAGGCCACAGCGGCGGCCATTGTGAACGGTGGAAGCAATGGCTCGGCAGTGGGTGGTGCTGGCGTGGCAATGCCCCTGCTCAAGGACGCGGTGGTCAGCTAG
- Protein Sequence
- MQLRVHPTMDCRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNNYNGATTTTPSSNSNPSSNGGGAATGGGGTGSGSAGGGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLHPPGSAHTSPQQREALNLSDSPPNSNLTNINIKREREQDKEPVEQDDIEHDLSTGHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAAAAGHHHHQQQQDAASEGEPEDDYGHGEHNTTGNSSSLHDDSETAQPMNGHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGCGSKPQDKDLAGGDKGVSSGKLNPLETLSLLSGMQFQVARNGTGENGEPQLMVNLELNGVKYSGVLVANVAHSKQSVTRNSSPCHEAEALPNEEEEEHDDEEEEEQRKAADEEDEAHRSPIKTENEHDEDQDMEATAAAIVNGGSNGSAVGGAGVAMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527091;
- 90% Identity
- iTF_00488497;
- 80% Identity
- -