Basic Information

Insect: Drosophila asahinai
Gene Symbol: retn
Assembly: GCA_008042795.1
Location: VNJZ01009758.1:139618-153415[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.8e-26 9.9e-23 80.6 0.0 2 89 283 368 282 368 0.96

2 2 2.1 7.2e+03 -2.3 0.5 8 11 536 539 503 579 0.58

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.8e-26	9.9e-23	80.6	0.0	2	89	283	368	282	368	0.96
2	2	2.1	7.2e+03	-2.3	0.5	8	11	536	539	503	579	0.58

Sequence Information

Coding Sequence: ATGGAGTTGCATTCGCGAGAGCTCAAGATGCAGTCGCAGTCGGAGTCGCAGTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCCGTGGATGGAGAGCACCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGCAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTCAGccatcatcatcaactgCCGCCGAATCATCCGCTCAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTCCAACACAGCGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGACTATGCGGCAGCCGCCCATGCTGCGGCCTTTGGTGCCAACATGCTGCCCACCACCATCAACTCGGGCTTCCCGCTGCCCCACAAttcggtggcggcggcagcggcagcagcctcCTTTGGCCACGTGACCTCGGCGCCCAGTGGCGGCAACTACAACGGTGGCACCACCACGACACCCAGCTCCAATAGCAATGCCAGTACCAATGGAGCcactggaggaggaggcagcacAGGAGGTGCAGGCACAGGATCAGCTagcggaggagcaggaggacaCCCCTTCTCATTCGCTTCCCCGACAGCAGCGCCCAGTGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGgTACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGACCTGTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGCCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGCAACCGCCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGCTGACGCCCATTTCGCGACCCTCCCTCCCGGGCGGCATGCAGCAGATGTCGCCTTTGGCCCTGGTCACCCATGCCGCGGTGGCCAACAACCAGCAGGCCcaggccgctgccgccgccgccgctgcccatCACCGCCTGATGGGAGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTACTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTGGGCGCTAGCCTGCCccaccagcagcatcagcagcaggcccagcagcagcagcagcagcagtcgcagcaacagcagcagcagcaacatcacctgcagcagtcgcagcaacagcagcagcagcaacatcacctgcagcagcatcagcgccAGCGCTCGCAGAGCCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCTCTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCGCCTCAGCAACGCGAAGCCCTGAACCTCTCCGACTCGCCGCCGAATCTCACGAACATCAAAAGGGAGCGCGAGCGAGATCCCACGCCCGAGCCCGTGGAGCAGGACGAGCAGGCCAATCACCAGCCTCCCCCAGCCAAACGCATGGGCAGCGGCCTGCTCCCCCCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGccgcggtggcggcggcggcgggcttCCACCATCAGCAGGCAAGTCACCAGCAGGACGCCGCCTCCGAGGGCGAGCCGGAGGACGAGTACGGCCAGGCGGAGCACAACACCACGGGCAACTCGTCCTCGCTAAACGACGACAGCGAGCCGCAGCCTATGAACGGGCATGGACATGGCCATGGCCTGGGACACCACCACCATCAGAGCCATCATCAGCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCGCCCAGCACCTCCACCACCACGGCCTCGGTGGGGCATCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAAAGCAGCAGCGGTGCCAAGCCCCAgagcggcggcagtggcaagGATCTAGCTGGGGAGGATAAGGGTTCGACTAGTGGCAAGCTGAATCCTTTGGAGACGCTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGAAATGGCACAGGTGAAAATGGCGAACAGCAGCTAATTGTCAATCTGGAGCTGAACGGCGTCAAGTACTCGGGTGTGCTGGTGGCCAATGTCCCTCACTCCTCCCAGAACGTGACGAGGACCAGCTCGCCCTGCCATGAAGGAGCCGAGGCCCCTTtaaacgaggaggaggagcctgatgaggaggaggaggagccaaaGGCAGCCGAGGTAGAGGAGGCCCATCGATCGCCCATCAAGCAGCAGGCAGAGCACGAGGAAACCGAAGACCAGGACAGTGCGGAGGTCCTTGTGaatggagctggaggaggaggctctGCTGTGGCTGGTGCTGGGCCCGTGGCTTTGCCCCTGGTCAGCTAG
Protein Sequence: MELHSRELKMQSQSESQLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNYNGGTTTTPSSNSNASTNGATGGGGSTGGAGTGSASGGAGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQAQQQQQQQSQQQQQQQHHLQQSQQQQQQQHHLQQHQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKRERERDPTPEPVEQDEQANHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQASHQQDAASEGEPEDEYGQAEHNTTGNSSSLNDDSEPQPMNGHGHGHGLGHHHHQSHHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSSSGAKPQSGGSGKDLAGEDKGSTSGKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGVKYSGVLVANVPHSSQNVTRTSSPCHEGAEAPLNEEEEPDEEEEEPKAAEVEEAHRSPIKQQAEHEETEDQDSAEVLVNGAGGGGSAVAGAGPVALPLVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00606101;
80% Identity: -