Basic Information

Insect: Drosophila leontia
Gene Symbol: retn
Assembly: GCA_008042735.1
Location: VNKB01001917.1:66222-88081[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.9e-26 9.2e-23 80.5 0.0 2 89 295 380 294 380 0.96

2 2 3.6 8.6e+03 -2.7 0.4 12 12 544 544 517 583 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.9e-26	9.2e-23	80.5	0.0	2	89	295	380	294	380	0.96
2	2	3.6	8.6e+03	-2.7	0.4	12	12	544	544	517	583	0.52

Sequence Information

Coding Sequence: ATGCAACTGCGTGTGCATCCTACTATGGACTGTCGTTCAACCAGCAATATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCTGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCTATAGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGCAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTAAGccatcatcatcaactgCCGCCGAATCATCCGCTGAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTAGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGattatgcagcagcagcccatgCAGCGGCCTTTGGAGCCAACATGCTGCCCACCACCATCAACTCGGGCTTTCCGCTGCCCCACAATTCGGTGgctgctgcagccgcagcTGCCTCCTTTGGCCATGTGACCTCGGCTCCAAGTGGTGGCAACAGCTACAATAACGGTGGAACCACCACAACAGCTAGCTCCAATAGTAATCCCAGCAGTAATGGAGGAGGAACAGGcacagctggaggaggagcagccacagGAACCGGCAGTGGCAATGCAAGCGGAGGAGGACACCCCTTCTCTTTTGCATCCCCAACAGCAGCGCCCAGTGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAGGAATTTCTGGAcgatttgttttcatttatgcaAAAGCGCGGTACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATTTGTATGAACTGTACAATTTAGTGATAGCCCGCGGCGGTCTGGTGGATGTTATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAATCTGAGCACGCCGGCAGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGTCGCTCTAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCGCTTCCGGGTGGCATGCAGCAAATGTCGCCCCTGGCCCTGGTCACCCATGCCGCGGTGGCTAACAATCAGCAGGCTCaggctgctgccgccgccgctgctgctcatcACCGATTGATGGGTGCCCCGGCCTTTGGGCAAATGCCCAACCTGGTCAAGCAGGAGATCGAAAGCCGTATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTGGGTGCTAGTCTGCCCcatcagcagcaccagcagcaacaggcacagcaccagcaacagcagcaacaatcgcagcagcagtctcaacagcagcagcagcaacatcacctgcagcagcaacagcagcagcgtcagCGTTCACAGAGCCCGGATATGAGCAAGCATGAGGCGCTCAGCGCCCAGGTGGCCCTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCCCCGCAGCAACGCGAAGCTTTGAACCTCTCCGACTCACCGCCGAATCTCACGAATATCAAAAGGGAACGCGAGCGGGAGCCGACGCCCGAGCCCGTGGAGCAGGACGACCTATCCGCTGGCCATCAACCACCGCCAGCCAAGCGCATGGGCAGCGGCCTCCTGCCACCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCcgcagtggcggcggcagcgggtTTCCACCATCAgcaggcggcagcggcggcggccggtcatcatcaccagcagcagcagcaacaggatgCCGCCTCCGAGGGTGAGCCGGAGGACGAGTATGGCCATGGAGAGCACAATACCACCGGCAACTCGTCCTCGCTACACGACGACAGCGAGACAGCGCAGCCGATGAATGGCCATGgacaccaccatcatcatcatcatcatcaccagagCCATCAGTTGGATAAATCAGATGATTCGGCCATTGAGAACTCGCCCAGCActtccaccaccaccgcctcgGTGGGTCATCGTCACAGCTCGCCAGTGTCCACCAAGAAGAAGAGCAGCTGTGGGTCAAAGCCACAGGATAAGGATCTAGCTGGGGATAGCAAAAACTCTAACAGCAAGCTGAATCCTTTGGAAACGCTGAGCCTGCTCTCCGGCATGCAGTTTCAGGTGGCCAGAAATGGCACCAGCGAGAATGGCGAACAGCAGTTAATGGTCAATCTAGAGCTGAATGGCGTCAAGTACTCGGGTGTTCTGGTGGCCAATGTGGCTCACTCCAACCAGAGCTTGACTAGAAACAGCTCGCCCTGCCACGAGGCTGCAGAACCTCTAAaccaggaggaggaagaggagcatGACGAAGAGGAAGAAGAGGAGCAAAGGAAAGTCGCTGAAGAGGAGGATGAAGCCCATCGATCGCCCATTAAGCAGGAGGCAGACAATGAGCATGGCGATGACCAGGATATGGAGTCAACAGCGGCGGCTATATTAAatggagggggaggaggaggaggaggcaatgGCTCGGCTGTGGGTGGACCAGTGGCCATGCCCCTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNSYNNGGTTTTASSNSNPSSNGGGTGTAGGGAATGTGSGNASGGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQQAQHQQQQQQSQQQSQQQQQQHHLQQQQQQRQRSQSPDMSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDLSAGHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAAAAGHHHQQQQQQDAASEGEPEDEYGHGEHNTTGNSSSLHDDSETAQPMNGHGHHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSSCGSKPQDKDLAGDSKNSNSKLNPLETLSLLSGMQFQVARNGTSENGEQQLMVNLELNGVKYSGVLVANVAHSNQSLTRNSSPCHEAAEPLNQEEEEEHDEEEEEEQRKVAEEEDEAHRSPIKQEADNEHGDDQDMESTAAAILNGGGGGGGGNGSAVGGPVAMPLVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00612597;
80% Identity: -