Basic Information

Insect: Drosophila subpulchrella
Gene Symbol: retn
Assembly: GCA_014743375.2
Location: NC:15925946-15954993[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.3e-26 6.9e-23 80.6 0.0 2 89 302 387 301 387 0.96

2 2 1.5 3.2e+03 -1.7 0.3 76 76 544 544 479 589 0.66

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.3e-26	6.9e-23	80.6	0.0	2	89	302	387	301	387	0.96
2	2	1.5	3.2e+03	-1.7	0.3	76	76	544	544	479	589	0.66

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAACCAGCAATATTGAACGAGATTCTGATCTGGGAGACGATTTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCACCATCAGCTGAGCGCCAAGGCGGCGATTGCGGCCCGCTTAAGTCACACAGTTTCCGGCGGAGGAGGGAACTTCGCCAGTCCCGAGCCACAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCAAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGTCTACACAGCATTCCAAATCTGCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGATTACGCGGCTGCAGCTCATGCGGCGGCTTTCGGGGCCAACATGCTGCCCACGACCATCAGCTCGGGATTCCCGCTGCCCCACAATTCGGTGgctgcggcggcggcggctgcCTCCTTTGGCCACGTGACCTCGGCGCCCAGTGGTGGAAACGGGAATGGGAGCAGCTACAATGGAGGCACCACCACCACGCCCAGCTCCAATCCGGCCACCACCAATGGAGGTGGCAGCAGCGGACCAGGAGGAACCGGAGGATCCGGCGGAGGTGGAGGAgggggaggaggaggaggaggtggaggcGGAGGAGCAGGTGCCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCCTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGATGACCCCAAACGCAAAGAGTTCCTGGATGATTTGTTCTCGTTTATGCAAAAGCGCGGTACGCCGATCAATCGGCTGCCGATTATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTGATTGCCCGCGGCGGTCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCTGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGTAATCGCCGGGAAGGACGACGCTCCAGCTACGGGCAGTACGAGGCCATGCACAGTCAGATGCCAATGACGCCCATTTCGCGACCCTCTCTGCCGGGTGGCATGCAGCAAATGTCGCCTCTGGCCTTGGTTACCCATGCCGCCGTGGCCAACAATCAGCAGGCAATCAACAATGCCGCCGCCGCAGCAGCCCATCATCGCCTGATGGGCGCTCCGGCCTTTGGCCAGATGCCCAATCTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGAATGCCCTCCGTGCTGGGTGGTGCCCATccccaccagcagcagcaacagcagcaacatcagcagcagcaacaccagcagcagcagcaacatcagcagcaacagtcgcaccagcagcagcaacatcaccTGCAACAGCAGCGACAGCGATCCCAGAGCCCCGATCTGAGCAAGCACGAGGCACTCAGCGCTCAGGTGGCACTGTGGCACATgtaccacaacaacaacagcccACCTGGATCGGCTCACACCTCGCCGCAGCAACGCGAAGCCCTGAACCTATCCGATTCGCCGCCAAATCTCACAAATATCAAAAGGGAACGCGAACGGGAACCCACGCCGGAGCCCGTGGACCAGGACGACCAGCCCCACCAGCCGCCTCCAGCCAAGCGCGTGGGCAGTGGCCTCCTGCCACCCGGCTTTCCCGCCAACTTCTATCTGAATCCCCACAACATGGCCGCCGTGGCAGCTGCAGCGGGATTCCATCATCCTTCGATGGGCCACCAGCAGGATGCCGCCTCCGAGGGCGAACCGGAGGACGACTATGCCCACGCCGAGCACAATACCACGGGCAACTCGTCCTCCATGAACGATGACAGCGAGCCGCAGCAGATGAACGGACATCATcatcaccaccaccaccagagcCACCAGCTGGACAAGTCCGACGACTCGGCCATCGAGAACTCGCCCACCACatccaccaccaccactggTGGTGGCTCGGTGGGTCATCGCCACAGCTCACCCGTTTCCACCAAGAAGAAGGGCGGCGGTAAGCCCCAGAGCGGCGGAAAGGATCTGCCGGCCGAGGACAAGGATACGCCCTCCACTGGCAAGCTCAATCCCCTCGAGACGCTGAGCCTGCTGTCCGGCATGCAGTTTCAAGTGGCAAGGAATGGAACTGGCGATAACGGCGAACCGCAGTTGATAGTGAATCTGGAGCTCAATGGCGTCAAGTACTCGGGCGTGCTGGTGGCCAACGTGCCGCTGTCCCAGGGCGACACAAGGACGAGCTCACCCTGCCACGCAGAAGGACCCGCCAACGAGGAGGAGCACGAAGAGGAGGAGCCGCCAAAGGCCGCTGAAGAGGATTCGGAGTCCCATCGATCGCCGGTCAAGCAGGAGAACGAGGAGGCCGACCAGGACATGGAGGCTAGCGAGGTCCTTGTGAACGGAGGTGCTGCGGCGGGGACTGGTGCTGCTGTCCCCTTGCTCAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCSGRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSGGNGNGSSYNGGTTTTPSSNPATTNGGGSSGPGGTGGSGGGGGGGGGGGGGGGGAGAHQFSFASPTAAPSGKEANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAINNAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPSVLGGAHPHQQQQQQQHQQQQHQQQQQHQQQQSHQQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDQPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHAEHNTTGNSSSMNDDSEPQQMNGHHHHHHHQSHQLDKSDDSAIENSPTTSTTTTGGGSVGHRHSSPVSTKKKGGGKPQSGGKDLPAEDKDTPSTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQGDTRTSSPCHAEGPANEEEHEEEEPPKAAEEDSESHRSPVKQENEEADQDMEASEVLVNGGAAAGTGAAVPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00505186;
80% Identity: -