Basic Information

Insect: Drosophila tani
Gene Symbol: retn
Assembly: GCA_008042535.1
Location: VNJO01000771.1:7663-20568[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.8e-26 1e-22 80.6 0.0 2 89 271 356 270 356 0.96

2 2 1.9 6.9e+03 -2.2 0.5 8 11 523 526 491 567 0.58

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.8e-26	1e-22	80.6	0.0	2	89	271	356	270	356	0.96
2	2	1.9	6.9e+03	-2.2	0.5	8	11	523	526	491	567	0.58

Sequence Information

Coding Sequence: ATGCAGTCGCAGTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCCGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGCAACTTTGCCAGTCCCGAGCCCCAGACCGAGCTACCCCTTAGccatcatcatcaactgCCGCCGAATCATCCGCTCAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTCCAACACAGCGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGATTATGCGGCAGCTGCCCATGCCGCTGCCTTTGGTGCCAACATGCTGCCCACCACCATCAACTCGGGCTTCCCGCTGCCCCACAAttcggtggcggcggcagcggcagcggcctcCTTTGGCCACGTGACCTCGGCGCCCAGCAGCGGCAACTACAACGGAGGCACCACCACGACACCCAGCTCCAATAGCAATGCCAGTACCAATGGAGGGGCAGGAACTGGAGGCAACacaggaggtggaggaggaggcagtaCAGCTGGTAGCGGAGCAGGAGCGCACCCCTTTTCATTCGCTTCCCCCACAGCAGCGCCCAGTGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCAAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGgTACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGTTGGACCTGTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGCCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGCAACCGCCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGCTGACCCCCATTTCGCGACCCTCGCTCCCGGGCGGCATGCAGCAGATGTCCCCTTTGGCCCTGGTCACCCATGCCGCGGTGGCCAACAACCAGCAGGCCcaggccgctgccgccgccgctgctgcccatCACCGCCTGATGGGTGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAAAGCCGCATGATGGAGTATTTGCAGTTGATCCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTAGGCGCTAGCCTGCCccaccagcagcatcagcagcaggcccagcaacagcagcagcagcagtcgcagcaacaacagcagcaacatcacctgcagcagtcgcagcaacagcagcagcagcaacatcacctgcagcagcatcagcgccAGCGCTCGCAGAGCCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCACTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCCCCGCAGCAACGCGAAGCCCTGAACCTCTCCGACTCGCCGCCGAATCTCACAAACATCAAAAGGGAGCGCGAGCGGGATCCCACGCCTGAGCCCGTGGAGCAGGACGAGCAGGCCAATCATCAGCCGCCGCCGGCCAAGCGCATGGGCAGCGGCCTGCTCCCCCCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCcgcggtggcagcggcagcgggtTTCCACCATCAGCAGGCGAGCCACCAGCAGGACGCCGCCTCCGAGGGAGAGCCGGAGGACGAGTACGGCCAGGCGGAGCACAATACCACCGGCAACTCGTCCTCGCTAAACGACGACAGCGAGCCGCAGCCGATGaatggccatggccataaCCTGGgacaccatcaccatcagAGCCATCATCAGCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCGCCCAGCACATCCACCACCACGGCCTCGGTGGGGCATCGCCACAGCTCCCCGGTGTCCACAAAGAAGAAGAGCGGCAGTGGAGCTAAGCCCCagggcggcggaggcggcaaGGATCTGGCTGGGGAGGATAAGGGTTCGACTAGTGGCAAGCTGAATCCTTTGGAGACGCTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGGAATGGCACAGGAGAGAATGGCGAACAGCAACTAGTTGTTAACCTGGAGCTGAACGGCGTCAAGTACTCGGGTGTCCTGGTGGCTAATCTTCCCCACACATCCCAGAGCGTCACAAGGACCAGCTCGCCCTGCCATGAAGGAGTTGAAGCCCCACtaaacgaggaggaggaacctgatgaggaggaggaggagccaaaGGCAGCCGAGGAAGAGGAGGCCCATCGATCGCCCGTTAAGCAACAGGCAGAGCAGGTGGAGGCCGAGGACCAGGACAGTGCGGAGGTCCTTGTGaatggagctggaggaggaggctctgCGGTGGCTAGTGCTGGGCCCGTGGCTTTGCCCCTGGTCAGCTAG
Protein Sequence: MQSQLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSSGNYNGGTTTTPSSNSNASTNGGAGTGGNTGGGGGGSTAGSGAGAHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQAQQQQQQQSQQQQQQHHLQQSQQQQQQQHHLQQHQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKRERERDPTPEPVEQDEQANHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQASHQQDAASEGEPEDEYGQAEHNTTGNSSSLNDDSEPQPMNGHGHNLGHHHHQSHHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGSGAKPQGGGGGKDLAGEDKGSTSGKLNPLETLSLLSGMQFQVARNGTGENGEQQLVVNLELNGVKYSGVLVANLPHTSQSVTRTSSPCHEGVEAPLNEEEEPDEEEEEPKAAEEEEAHRSPVKQQAEQVEAEDQDSAEVLVNGAGGGGSAVASAGPVALPLVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00479957;
80% Identity: -