Basic Information

Insect: Drosophila anomelani
Gene Symbol: retn
Assembly: GCA_035045905.1
Location: JAWNOO010000032.1:1537986-1560102[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.4e-26 1.1e-22 80.5 0.0 2 89 295 380 294 380 0.96

2 2 4.8 1.2e+04 -2.9 0.3 16 16 541 541 516 578 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.4e-26	1.1e-22	80.5	0.0	2	89	295	380	294	380	0.96
2	2	4.8	1.2e+04	-2.9	0.3	16	16	541	541	516	578	0.52

Sequence Information

Coding Sequence: ATGCAACTGCGTGTGCATCCGACTATGGACTGTCGTTCAACCAGTAATATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCCGTGGATGGAGAGCACCATCAGCTGAGCGCCAAGGCGGCTATTGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGCGGCAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTGAGccatcatcatcaactGCCGCCGAATCATCCGCTGAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGATTATGCAGCAGCCGCCCATGCAGCGGCCTTTGGGGCCAACATGCTGCCCACCACCATTAACTCGGGCTTCCCGCTGCCCCACAATTCGGTggctgcagcggcggcagctgccTCCTTTGGGCATGTGACCTCGGCTCCAAGTGGTGGCAACAACAGCTACAACGGTGCCACTACCACAACACCCAGTTCTAATAGTAATCCCAGCAGtaatggaggaggaggagctgccaCTGGGGGAGGAGGTACAGGATCAGGCTCAGGAtcaggtggaggtggaggcggACACCCCTTCTCATTCGCATCCCCGACAGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGGCACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAACTGTACAACCTGGTGATAGCCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTAAGCACGCCGGCGGAGCTGCAGGCAGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCTCTGCCGGGTGGCATGCAACAAATGTCGCCTCTGGCCTTGGTCACCCATGCCGCTGTGGCCAACAATCAGCAGGCTCaggctgctgccgccgccgctgctgcccaTCACCGACTGATGGGTGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCTTGGGCGCTAGCCTGcctcatcagcagcagcagcaggcgcagcagcagcaacaccagcagcagcagcagtcacagtcgcagcagcaacagcaacatcacctgcagcagcaacagcagcagcgtcagCGCTCCCAGAGTCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCTCTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCCCCGCAGCAACGCGAAGCTCTGAACCTCTCCGACTCGCCGCCAAATCTCACGAACATCAACATCAAAAGGGAACGCGAGCAGGATAAGGAGCCCGTGGAGCAGGATGACCATGACCATGACCTTTCCACCGGCCACCAGCCGCCGCCAGCCAAGCGCATGGGCAGCGGCCTCCTGCCACCCGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGCcgcagtggcagcagcggctGGCTTCCACCATCAAcaggcggcagcggcggcggccggtcatcatcatcaacagcagcagcagcaggatgccACCTCCGAGGGCGAGCCGGAGGACGACTACGGCCATGGGGAGCACAATACCACCGGCAACTCGTCCTCGCTGCACGACGACAGCGAGACAGCGCAGCCCATGAATGGCCATggacaccaccaccatcatcatcaccaccaccagagCCACCAGCTGGACAAATCGGATGATTCGGCCATTGAGAACTCGCCCAGCACTTCCACCACCACCGCTTCGGTGGGTCACCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAGAGCGGCTGTGGGTCCAAGCCACAGGACAAGGATCTGGCTGGCGGGGATAAGGGCGTATCCAGTGGCAAGCTGAATCCCTTGGAAACGCTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCGGCGAGAATGGTGAGCAGCAGCTAATGGTCAATCTAGAGCTGAACGGCGTCAAGTATTCGGGAGTCCTGGTGGCCAATGTGACTCACTCCAAGCAGAGCGTCACAAGGAACAGCTCGCCCTGCCACGAGGCTGAAGCTCTGCCCaacgaggaagaggaggagcacGACGatgaggaagaggaggagcaaAGGAAAGCTGCCGACGAGGAGGACGAAGCCCATCGATCGCCCATCAAGGCAGAGAACGAGCATGACGAGGACCAGGACATGGAGGCCGCAGCGGCGGCCATTGTGAATGGTGGAGGCAATGGCTCGGCAGTGGGTGGTGCTGGCGTGGCACTGCCCCTGCTCAAGGACGCGGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNNSYNGATTTTPSSNSNPSSNGGGGAATGGGGTGSGSGSGGGGGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQQQQAQQQQHQQQQQSQSQQQQQHHLQQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNINIKREREQDKEPVEQDDHDHDLSTGHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAAAAGHHHQQQQQQDATSEGEPEDDYGHGEHNTTGNSSSLHDDSETAQPMNGHGHHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGCGSKPQDKDLAGGDKGVSSGKLNPLETLSLLSGMQFQVARNGTGENGEQQLMVNLELNGVKYSGVLVANVTHSKQSVTRNSSPCHEAEALPNEEEEEHDDEEEEEQRKAADEEDEAHRSPIKAENEHDEDQDMEAAAAAIVNGGGNGSAVGGAGVALPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00612597;
80% Identity: -