Basic Information

Insect: Drosophila suzukii
Gene Symbol: retn
Assembly: GCA_013340165.1
Location: WWNF01000003.1:5894169-5920164[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.3e-26 7.6e-23 80.6 0.0 2 89 302 387 301 387 0.96

2 2 1.6 3.8e+03 -1.8 0.3 7 7 543 543 480 588 0.66

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.3e-26	7.6e-23	80.6	0.0	2	89	302	387	301	387	0.96
2	2	1.6	3.8e+03	-1.8	0.3	7	7	543	543	480	588	0.66

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAACCAGCAATATTGAACGAGATTCTGATCTGGGAGACGATTTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCACCATCAGCTGAGCGCCAAGGCGGCGATTGCGGCCCGCTTAAGTCACACAGTTTCCGGCGGAGGAGGGAACTTCGCCAGTCCCGAGCCACAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCAAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGTCTACACAGCATTCCAAATCTGCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGATTACGCGGCTGCAGCTCATGCGGCGGCTTTCGGAGCCAATATGCTGCCCACGACCATCAGCTCGGGATTCCCGCTGCCCCACAACTCGGTGgctgcggcggcggcggctgccTCCTTTGGCCACGTGACCTCGGCGCCCAGTGGCGGAAACGGGAATGGGAGCAGCTACAACGGAGGCACCACCACCACGCCCAGCTCCAATCCGGCCACAACCAATGGCGGTGGCAACAGCGGACCAGGAGGAACCGGAGGATCCggcggaggtggaggaggaggtggaggtggaggagcaggtgCCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCCTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGATGACCCCAAACGCAAAGAGTTCCTGGACGATTTGTTCTCGTTTATGCAAAAGCGCGGTACGCCGATCAATCGGCTGCCGATTATGGCCAAATCGGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATTGCCCGCGGCGGTTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGTAATCGCCGGGAAGGACGACGCTCCAGCTACGGGCAGTACGAGGCCATGCACAGTCAGATGCCAATGACGCCCATTTCGCGACCCTCTCTGCCGGGTGGCATGCAACAAATGTCGCCTCTGGCTTTGGTCACCCATGCCGCCGTGGCCAACAATCAGCAGGCAATCAACAATGCCGCCGCCGCAGCAGCCCATCATCGCCTGATGGGTGCTCCGGCCTTTGGCCAGATGCCCAATCTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGTATGCCCTCCGTGCTGGGTGGCGCCCATccccaccagcagcagcaacagcaacatcagcagcagcaacaccagcagcagcagcaacatcagcagcaacagtcgcaccagcagcagcaacatcacctgcagcagcagcgtcAGCGATCCCAGAGCCCCGATCTGAGCAAGCACGAGGCACTCAGTGCTCAGGTGGCTTTGTGGCACATgtaccacaacaacaacagcccaCCGGGATCGGCTCACACATCGCCGCAGCAACGCGAAGCCCTGAACCTATCCGATTCGCCGCCAAATCTCACAAATATCAAAAGGGAACGCGAACGGGAACCCACGCCGGAGCCCGTGGACCAGGACGACCAGCCCCACCAGCCGCCTCCTGCCAAGCGCGTGGGCAGTGGCCTCCTGCCACCCGGCTTTCCCGCCAACTTCTACCTGAATCCCCACAACATGGCCGCCGTGGCAGCTGCAGCGGGATTCCACCATCCATCGATGGGCCACCAGCAGGATGCCGCCTCCGAGGGCGAACCGGAGGACGACTACGCCCACGCCGAGCACAATACCACGGGCAACTCGTCCTCCATGAACGATGACAGCGAGCCGCAGCAGATGAACGGacatcaccaccaccaccaccagagCCACCAGCTGGACAAGTCCGACGACTCGGCCATCGAGAACTCGCCCACCAcatccaccaccaccactggTGGCTCGGTGGGTCATCGCCACAGCTCACCCGTTTCCACCAAGAAGAAGGGCGGCGGTAAGCCCCAGAGCGGCGGAAAGGATCTGCCGGCCGAGGACAAGGATACGCCCTCCACTGGCAAGCTCAATCCCCTCGAGACACTGAGCCTGCTGTCCGGCATGCAGTTTCAAGTGGCAAGGAATGGAACTGGCGATAACGGCGAACCGCAGTTGATTGTGAATCTGGAGCTCAATGGCGTCAAGTACTCGGGCGTGCTGGTGGCTAATGTGCCGCTGTCCCAGGGCGAAACAAGGACGAGCTCACCCTGCCACGCAGAAGCACCCGCCAACGAGGAGGAGCACGACGAGGAGGAGCCGCCGAAGGCCGCTGAAGAGGATTCGGAGTCCCATCGATCGCCGGTCAAGCAGGAGAACGAGGAGGCCGACCAGGACATGGAGACCAGCGAGGTCCTTGTGAACGGAGGCGCTGCGGCGGGGGCTGGTGCTGCTGTCCCCTTGCTCAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCSGRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSGGNGNGSSYNGGTTTTPSSNPATTNGGGNSGPGGTGGSGGGGGGGGGGGAGAHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAINNAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPSVLGGAHPHQQQQQQHQQQQHQQQQQHQQQQSHQQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDQPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHAEHNTTGNSSSMNDDSEPQQMNGHHHHHHQSHQLDKSDDSAIENSPTTSTTTTGGSVGHRHSSPVSTKKKGGGKPQSGGKDLPAEDKDTPSTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQGETRTSSPCHAEAPANEEEHDEEEPPKAAEEDSESHRSPVKQENEEADQDMETSEVLVNGGAAAGAGAAVPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00505186;
80% Identity: -