Basic Information

Insect: Drosophila mauritiana
Gene Symbol: retn
Assembly: GCA_004382145.1
Location: NC:21934996-21957150[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.8e-26 6.3e-23 80.6 0.0 2 89 296 381 295 381 0.96

2 2 2.8 6.4e+03 -2.7 0.2 15 15 537 537 513 574 0.52

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.8e-26	6.3e-23	80.6	0.0	2	89	296	381	295	381	0.96
2	2	2.8	6.4e+03	-2.7	0.2	15	15	537	537	513	574	0.52

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAACCAGCAATATTGAACGCGATTCCGATCTGGGGGACGATTTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCCCGCCTGAGTCACACAGTTTCCGGCGGCGGAGGGAGCTTCGCCAGCCCCGAACCGCAGACCGAGCTGCCCCTGAGCCATCACCATCAACTGCCGCCGAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTCCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGACTACGCTGCCGCAGCACATGCCGCTGCTTTCGGGGCCAACATGCTGCCCACGACGATCAGCTCGGGCTTCCCACTGCCCCACAACTCGGTGGCCTTTGGCCACGTCACATCGGCGCCCAGCGGTGGGAATGGGAGCAGCTACAACGGAGGCACCACCCCCACGAACAGCTCCAATAGCAATGCGACCACCAATGGAGGCGGCACCGCCGGACCTGGAGGAACAGGAGGATCGggcggcggaggagcaggaggaggtggaggcgGCGGAGGAGTGGGTGGCCACCAGTTCTCGTTCGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCGAACTCGTCGACGTCCAGCGAGGCTTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTACGAAATCAATGATGACCCCAAGCGCAAAGAGTTCCTGGACGACTTGTTCTCGTTTATGCAAAAGCGCGGAACTCCGATCAATCGGCTGCCGATCATGGCCAAGTCGGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCACCTGCCCTCCAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGCGACCCTCCCTGCCCGGTGGCATGCAGCAAATGTCGCCGCTGGCACTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCTCaggccgccgctgccgccgccgcagctCATCATCGCCTGATGGGCGCTCCCGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTACCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGCATGCCGCCAGTCCTGGGCGCCAACCATccccaccagcagcagcactctcagcagcagcagcatcaccaccagcagcagcagcagtcgcagcagcaacaccacctgcagcagcagcgccagcGGTCGCAGAGTCCGGATCTGAGCAAGCACGAGGCACTCAGTGCTCAGGTGGCCCTGTGGCACATgtaccacaacaacaacagcccaCCGGGATCGGCACACACCTCGCCGCAGCAACGCGAAGCCCTGAACCTGTCCGACTCGCCTCCAAATCTCACAAATATCAAGCGGGAACGCGAACGGGAACCCACTCCAGAGCCCGTGGACCAGGATGACAAATTTGTGGACCAGCCGCCTCCAGCGAAGCGCGTGGGCAGtggcctccttccgcacggCTTTCCCGCCAACTTTTACCTGAATCCACACAACATGGCCGCTGTGGCAGCAGCTGCGGGATTCCATCACCCATCCATGGGCCACCAGCAGGATGCCGCATCCGAGGGCGAGCCAGAGGACGACTATGCCCACGGCGAGCACAATACCACAGGCAACTCGTCCTCCATGCACGACGACAGCGAACCGCAGCAGATGAACggacaccaccaccaccacctgaCCCACCATCTGGACAAGTCCGATGACTCGGCCATTGAGAACTCACCCACCACGTCGACCACCACCGGTGGGTCGGTGGGTCATCGTCACAGTTCGCCCGTTTCCACCAAGAAAAAGGGCGGCTCCAAGCCCCAGAGTGGAGGGAAGGATCTGCCGGCCGAGGATAAGGATGCGTCGTCCAGTGGCAAGCTCAATCCGCTCGAGACGCTGAGCCTGCTGTCCGGAATGCAGTTTCAAGTGGCAAGAAATGGAACTGGCGATAACGGCGAACCGCAGCTGATTGTCAATCTGGAGCTTAATGGCGTCAAGTACTCGGGAGTGCTGGTGGCCAATGTGCCGCTGTCCGAAAGCGAGACAAGGACGAGCTCACCCTGCCACGCCGAAGCACCGACAGccgaggaggagaaggatgaggaggaggaggagccgAAAGCCGCTGAAGAGGAATCGCATCGATCGCCAGTTAAACAGGAGAACGAGGATGCCGACCAGGACATGGAGGGCAGCGAAGTCCTTCTGAACGGAGGCGCCTcggcggtgggtggtgctgctgctggtgtgggtgtgggtgtgccCCTGCTCAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCSGRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAFGHVTSAPSGGNGSSYNGGTTPTNSSNSNATTNGGGTAGPGGTGGSGGGGAGGGGGGGGVGGHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGANHPHQQQHSQQQQHHHQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGSGLLPHGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHGEHNTTGNSSSMHDDSEPQQMNGHHHHHLTHHLDKSDDSAIENSPTTSTTTGGSVGHRHSSPVSTKKKGGSKPQSGGKDLPAEDKDASSSGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSESETRTSSPCHAEAPTAEEEKDEEEEEPKAAEEESHRSPVKQENEDADQDMEGSEVLLNGGASAVGGAAAGVGVGVPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00505186;
80% Identity: -